Difference between revisions of "TSS:Hg 101222.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=-14630 |entrez_id=79670 |gc_percent=0.477612 |gene_alias=PAPD6|TUT7 |gene_description=zinc finger CCHC-type containing 6 |gene_n...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |TUT7= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| + | |distance= | ||
|distance_to_tss=-14630 | |distance_to_tss=-14630 | ||
| + | |end=86369122 | ||
|entrez_id=79670 | |entrez_id=79670 | ||
|gc_percent=0.477612 | |gc_percent=0.477612 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_024617 | |nearest_refseq=NM_024617 | ||
|nearest_unigene=Hs.597057 | |nearest_unigene=Hs.597057 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=86369111 | ||
| + | |strand=- | ||
|tata_box="-35(CTCCTTAAAAAC,-,0.00),-33(CCTTAAAAACCC,+,0.00)" | |tata_box="-35(CTCCTTAAAAAC,-,0.00),-33(CCTTAAAAACCC,+,0.00)" | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_101222.1 | |tss_id=hg_101222.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 18:34, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -14630 |
|---|---|
| Nearest PromoterID: | NM_001185059 |
| Entrez ID: | 79670 |
| Nearest Unigene: | Hs.597057 |
| Nearest Refseq: | NM_024617 |
| Nearest Ensembl: | ENSG00000083223 |
| Gene Name: | ZCCHC6 |
| Gene Alias: | PAPD6 |
| Gene Description: | zinc finger CCHC-type containing 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.477612 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-35(CTCCTTAAAAAC,-,0.00),-33(CCTTAAAAACCC,+,0.00)" |
