Difference between revisions of "TSS:Hg 240168.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AY358772:-24 |chr=chr3 |cpg_percent=0.12 |distance=-24 |distance_to_tss=-156 |end=111859575 |entrez_id=90102 |gc_percent=0.761194 |gene_alias=LL5b|LL5be...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |LL5beta= | ||
|all_trans=AY358772:-24 | |all_trans=AY358772:-24 | ||
|chr=chr3 | |chr=chr3 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=-156 | |distance_to_tss=-156 | ||
|end=111859575 | |end=111859575 | ||
| + | |end_of_center_position=185919472 | ||
|entrez_id=90102 | |entrez_id=90102 | ||
|gc_percent=0.761194 | |gc_percent=0.761194 | ||
| − | |gene_alias=LL5b | + | |gene_alias=LL5b |
|gene_description=pleckstrin homology like domain family B member 2 | |gene_description=pleckstrin homology like domain family B member 2 | ||
|gene_id=100128035 | |gene_id=100128035 | ||
| Line 24: | Line 26: | ||
|species=human | |species=human | ||
|start=111859555 | |start=111859555 | ||
| + | |start_of_center_position=185919471 | ||
|strand=- | |strand=- | ||
|transcript_name=AY358772 | |transcript_name=AY358772 | ||
Revision as of 12:53, 13 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 185919471 |
|---|---|
| End of the center position in the TSS region: | 185919472 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AY358772 |
|---|---|
| Distance: | -24 |
| Num_trans: | 1 |
| All_trans: | AY358772:-24 |
TATA-Box annotation
| Distance to TSS: | -156 |
|---|---|
| Nearest PromoterID: | NM_001134439 |
| Entrez ID: | 90102 |
| Nearest Unigene: | Hs.603252 |
| Nearest Refseq: | NM_145753 |
| Nearest Ensembl: | ENSG00000144824 |
| Gene Name: | VGSA5840 |
| Gene Alias: | LL5b |
| Gene Description: | pleckstrin homology like domain family B member 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.761194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
