Difference between revisions of "Template:PeakPage"
From referenceTSS
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<tr><th scope="row" class="item_label">End:</th><td>[[end::{{{end}}}]]</td></tr> | <tr><th scope="row" class="item_label">End:</th><td>[[end::{{{end}}}]]</td></tr> | ||
<tr><th scope="row" class="item_label">Strand:</th><td>[[strand::{{{strand}}}]]</td></tr> | <tr><th scope="row" class="item_label">Strand:</th><td>[[strand::{{{strand}}}]]</td></tr> | ||
+ | <tr><th scope="row" class="item_label">TSS Score:</th><td>[[strand::{{{strand}}}]]</td></tr> | ||
</table> | </table> | ||
</div></td></tr> | </div></td></tr> |
Revision as of 14:14, 21 February 2018
Basic information about the TSS
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Gene and protein annotation
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Transcript annotation
Transcript_name: | {{{transcript_name}}} |
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Distance: | {{{distance}}} |
Num_trans: | {{{num_trans}}} |
All_trans: | {{{all_trans}}} |
TSS classification
Chr: | {{{chr}}} |
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Start: | {{{start}}} |
End: | {{{end}}} |
Strand: | {{{strand}}} |
TATA-Box annotation
TSS Score: | {{{tss_score}}} |
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Distance to TSS: | {{{distance_to_tss}}} |
Nearest PromoterID: | {{{nearest_promoter_id}}} |
Entrez ID: | {{{entrez_id}}} |
Nearest Unigene: | {{{nearest_unigene}}} |
Nearest Refseq: | {{{nearest_refseq}}} |
Nearest Ensembl: | {{{nearest_ensembl}}} |
Gene Name: | {{{gene_name}}} |
Gene Alias: | {{{gene_alias}}} |
Gene Description: | {{{gene_description}}} |
Gene Type: | {{{gene_type}}} |
CpG%: | {{{cpg_percent}}} |
GC%: | {{{gc_percent}}} |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | {{{tata_box}}} |