Difference between revisions of "TSS:Hg 241139.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000510197.5:237 NM_001242936:237 uc003hjv.4:237 AK124936:237 ENST00000512895.5:301 uc062xlv.1:301 |chr=chr4 |cpg_percent=0.175 |distance=237 |dist...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CD36L2= | ||
| + | |EPM4= | ||
| + | |HLGP85= | ||
| + | |LGP85= | ||
| + | |LIMP-2= | ||
| + | |LIMPII= | ||
| + | |SR-BII= | ||
|all_trans=ENST00000510197.5:237 NM_001242936:237 uc003hjv.4:237 AK124936:237 ENST00000512895.5:301 uc062xlv.1:301 | |all_trans=ENST00000510197.5:237 NM_001242936:237 uc003hjv.4:237 AK124936:237 ENST00000512895.5:301 uc062xlv.1:301 | ||
|chr=chr4 | |chr=chr4 | ||
| Line 6: | Line 13: | ||
|distance_to_tss=98 | |distance_to_tss=98 | ||
|end=76213803 | |end=76213803 | ||
| + | |end_of_center_position=153802404 | ||
|entrez_id=950 | |entrez_id=950 | ||
|gc_percent=0.78607 | |gc_percent=0.78607 | ||
| − | |gene_alias=AMRF | + | |gene_alias=AMRF |
|gene_description=scavenger receptor class B member 2 | |gene_description=scavenger receptor class B member 2 | ||
|gene_id=100129583 | |gene_id=100129583 | ||
| Line 24: | Line 32: | ||
|species=human | |species=human | ||
|start=76213798 | |start=76213798 | ||
| + | |start_of_center_position=153802403 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000510197.5 NM_001242936 uc003hjv.4 AK124936 | |transcript_name=ENST00000510197.5 NM_001242936 uc003hjv.4 AK124936 | ||
Revision as of 12:30, 14 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 153802403 |
|---|---|
| End of the center position in the TSS region: | 153802404 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000510197.5 NM_001242936 uc003hjv.4 AK124936 |
|---|---|
| Distance: | 237 |
| Num_trans: | 6 |
| All_trans: | ENST00000510197.5:237 NM_001242936:237 uc003hjv.4:237 AK124936:237 ENST00000512895.5:301 uc062xlv.1:301 |
TATA-Box annotation
| Distance to TSS: | 98 |
|---|---|
| Nearest PromoterID: | NM_005506 |
| Entrez ID: | 950 |
| Nearest Unigene: | Hs.349656 |
| Nearest Refseq: | NM_005506 |
| Nearest Ensembl: | ENSG00000138760 |
| Gene Name: | family with sequence similarity 47 member E |
| Gene Alias: | AMRF |
| Gene Description: | scavenger receptor class B member 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.175 |
| GC%: | 0.78607 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
