Difference between revisions of "TSS:Hg 242758.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000380828.6:4 NM_001287061:4 uc011kee.4:4 ENST00000439720.3:11 uc064eap.1:11 AK303006:11 |chr=chr7 |cpg_percent=0.005 |distance=4 |distance_to_tss...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |RAP1= | ||
|all_trans=ENST00000380828.6:4 NM_001287061:4 uc011kee.4:4 ENST00000439720.3:11 uc064eap.1:11 AK303006:11 | |all_trans=ENST00000380828.6:4 NM_001287061:4 uc011kee.4:4 ENST00000439720.3:11 uc064eap.1:11 AK303006:11 | ||
|chr=chr7 | |chr=chr7 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=-4 | |distance_to_tss=-4 | ||
|end=66755878 | |end=66755878 | ||
| + | |end_of_center_position=22165168 | ||
|entrez_id=27342 | |entrez_id=27342 | ||
|gc_percent=0.363184 | |gc_percent=0.363184 | ||
| − | |gene_alias=RABEX5 | + | |gene_alias=RABEX5 |
|gene_description=RAB guanine nucleotide exchange factor 1 | |gene_description=RAB guanine nucleotide exchange factor 1 | ||
|gene_id=27342 | |gene_id=27342 | ||
| Line 22: | Line 24: | ||
|nearest_unigene=Hs.530053 | |nearest_unigene=Hs.530053 | ||
|num_trans=6 | |num_trans=6 | ||
| + | |rabex-5= | ||
|species=human | |species=human | ||
|start=66755877 | |start=66755877 | ||
| + | |start_of_center_position=22165167 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000380828.6 NM_001287061 uc011kee.4 | |transcript_name=ENST00000380828.6 NM_001287061 uc011kee.4 | ||
Revision as of 15:51, 10 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 22165167 |
|---|---|
| End of the center position in the TSS region: | 22165168 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000380828.6 NM_001287061 uc011kee.4 |
|---|---|
| Distance: | 4 |
| Num_trans: | 6 |
| All_trans: | ENST00000380828.6:4 NM_001287061:4 uc011kee.4:4 ENST00000439720.3:11 uc064eap.1:11 AK303006:11 |
TATA-Box annotation
| Distance to TSS: | -4 |
|---|---|
| Nearest PromoterID: | NM_001287061 |
| Entrez ID: | 27342 |
| Nearest Unigene: | Hs.530053 |
| Nearest Refseq: | NM_014504 |
| Nearest Ensembl: | ENSG00000154710 |
| Gene Name: | RAB guanine nucleotide exchange factor 1 |
| Gene Alias: | RABEX5 |
| Gene Description: | RAB guanine nucleotide exchange factor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.363184 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
