Difference between revisions of "TSS:Hg 242848.1"
From referenceTSS
(Created page with "{{TSSDetail |chr=chr7 |cpg_percent=0.01 |distance= |distance_to_tss=10555 |end=92517985 |entrez_id=5189 |gc_percent=0.38806 |gene_alias=HMLR1|PBD1A|PBD1B|ZWS|ZWS1 |gene_descri...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |PBD1A= | ||
| + | |PBD1B= | ||
| + | |ZWS= | ||
| + | |ZWS1= | ||
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 5: | Line 9: | ||
|distance_to_tss=10555 | |distance_to_tss=10555 | ||
|end=92517985 | |end=92517985 | ||
| + | |end_of_center_position=47974950 | ||
|entrez_id=5189 | |entrez_id=5189 | ||
|gc_percent=0.38806 | |gc_percent=0.38806 | ||
| − | |gene_alias=HMLR1 | + | |gene_alias=HMLR1 |
|gene_description=peroxisomal biogenesis factor 1 | |gene_description=peroxisomal biogenesis factor 1 | ||
|gene_name=PEX1 | |gene_name=PEX1 | ||
| Line 18: | Line 23: | ||
|species=human | |species=human | ||
|start=92517966 | |start=92517966 | ||
| + | |start_of_center_position=47974949 | ||
|strand=+ | |strand=+ | ||
|tata_box="37(TTCCATAAGAGG,-,0.00)" | |tata_box="37(TTCCATAAGAGG,-,0.00)" | ||
Revision as of 18:42, 10 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 47974949 |
|---|---|
| End of the center position in the TSS region: | 47974950 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 10555 |
|---|---|
| Nearest PromoterID: | NM_001282678 |
| Entrez ID: | 5189 |
| Nearest Unigene: | Hs.164682 |
| Nearest Refseq: | NM_000466 |
| Nearest Ensembl: | ENSG00000127980 |
| Gene Name: | PEX1 |
| Gene Alias: | HMLR1 |
| Gene Description: | peroxisomal biogenesis factor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.38806 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "37(TTCCATAAGAGG,-,0.00)" |
