Personal tools

Difference between revisions of "TSS:Hg 242850.1"

From referenceTSS

Jump to: navigation, search
(Created page with "{{TSSDetail |all_trans=ENST00000449296.6:-60 ENST00000446141.5:-60 NM_001284310:-60 uc003sjn.5:-60 uc064auw.1:-60 AK092471:-60 ENST00000495686.1:101 uc064avj.1:101 ENST0000045...")
 
Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 +
|GCS1L=
 
|all_trans=ENST00000449296.6:-60 ENST00000446141.5:-60 NM_001284310:-60 uc003sjn.5:-60 uc064auw.1:-60 AK092471:-60 ENST00000495686.1:101 uc064avj.1:101 ENST00000453823.5:-358 uc064avd.1:-358
 
|all_trans=ENST00000449296.6:-60 ENST00000446141.5:-60 NM_001284310:-60 uc003sjn.5:-60 uc064auw.1:-60 AK092471:-60 ENST00000495686.1:101 uc064avj.1:101 ENST00000453823.5:-358 uc064avd.1:-358
 
|chr=chr7
 
|chr=chr7
Line 6: Line 7:
 
|distance_to_tss=60
 
|distance_to_tss=60
 
|end=927156
 
|end=927156
 +
|end_of_center_position=48049866
 
|entrez_id=11033
 
|entrez_id=11033
 
|gc_percent=0.60199
 
|gc_percent=0.60199
|gene_alias=CENTA1|GCS1L|p42IP4
+
|gene_alias=CENTA1
 
|gene_description=ArfGAP with dual PH domains 1
 
|gene_description=ArfGAP with dual PH domains 1
 
|gene_id=11033
 
|gene_id=11033
Line 22: Line 24:
 
|nearest_unigene=Hs.602573
 
|nearest_unigene=Hs.602573
 
|num_trans=10
 
|num_trans=10
 +
|p42IP4=
 
|species=human
 
|species=human
 
|start=927155
 
|start=927155
 +
|start_of_center_position=48049865
 
|strand=-
 
|strand=-
 
|transcript_name=ENST00000449296.6 ENST00000446141.5 NM_001284310 uc003sjn.5 uc064auw.1 AK092471
 
|transcript_name=ENST00000449296.6 ENST00000446141.5 NM_001284310 uc003sjn.5 uc064auw.1 AK092471

Revision as of 18:42, 10 May 2019

Basic information about the TSS


TSS ID:hg_242850.1
Species:human
Chr:chr7
TSS Classification:yes
Start:927155
End:927156
Strand:-
TSS Score:1
Start of the center position in the TSS region:48049865
End of the center position in the TSS region:48049866



Gene and protein annotation


Transcript_name:ENST00000449296.6 ENST00000446141.5 NM_001284310 uc003sjn.5 uc064auw.1 AK092471
Distance:-60
GeneID:11033
HGNC/MGI_ID:HGNC:16486
UniProt_ID:H0Y7Q1 O75689
Gene_name:ArfGAP with dual PH domains 1
Gene_symbol:ADAP1
Gene_synonyms:GCS1L
Gene_source:HGNC:16486



Transcript annotation


Transcript_name:ENST00000449296.6 ENST00000446141.5 NM_001284310 uc003sjn.5 uc064auw.1 AK092471
Distance:-60
Num_trans:10
All_trans:ENST00000449296.6:-60 ENST00000446141.5:-60 NM_001284310:-60 uc003sjn.5:-60 uc064auw.1:-60 AK092471:-60 ENST00000495686.1:101 uc064avj.1:101 ENST00000453823.5:-358 uc064avd.1:-358



TATA-Box annotation


Distance to TSS:60
Nearest PromoterID:NM_001284310
Entrez ID:11033
Nearest Unigene:Hs.602573
Nearest Refseq:NM_006869
Nearest Ensembl:ENSG00000105963
Gene Name:ArfGAP with dual PH domains 1
Gene Alias:CENTA1
Gene Description:ArfGAP with dual PH domains 1
Gene Type:protein-coding
CpG%:0.04
GC%:0.60199
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):