Difference between revisions of "TSS:Hg 243034.1"
From referenceTSS
(Created page with "{{TSSDetail |chr=chr8 |cpg_percent=0.145 |distance= |distance_to_tss=21 |end=143973515 |entrez_id=5339 |gc_percent=0.78607 |gene_alias=EBS1|EBSMD|EBSND|EBSO|EBSOG|EBSPA|HD1|LG...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |EBSMD= | ||
| + | |EBSND= | ||
| + | |EBSO= | ||
| + | |EBSOG= | ||
| + | |EBSPA= | ||
| + | |HD1= | ||
| + | |LGMD2Q= | ||
| + | |PCN= | ||
| + | |PLEC1= | ||
| + | |PLEC1b= | ||
| + | |PLTN= | ||
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
| Line 5: | Line 16: | ||
|distance_to_tss=21 | |distance_to_tss=21 | ||
|end=143973515 | |end=143973515 | ||
| + | |end_of_center_position=109451259 | ||
|entrez_id=5339 | |entrez_id=5339 | ||
|gc_percent=0.78607 | |gc_percent=0.78607 | ||
| − | |gene_alias=EBS1 | + | |gene_alias=EBS1 |
|gene_description=plectin | |gene_description=plectin | ||
|gene_name=PLEC | |gene_name=PLEC | ||
| Line 18: | Line 30: | ||
|species=human | |species=human | ||
|start=143973500 | |start=143973500 | ||
| + | |start_of_center_position=109451258 | ||
|strand=+ | |strand=+ | ||
|tata_box="43(GCTTAAAGAGGC,+,0.00)" | |tata_box="43(GCTTAAAGAGGC,+,0.00)" | ||
Revision as of 11:03, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 109451258 |
|---|---|
| End of the center position in the TSS region: | 109451259 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 21 |
|---|---|
| Nearest PromoterID: | NM_201378 |
| Entrez ID: | 5339 |
| Nearest Unigene: | Hs.434248 |
| Nearest Refseq: | NM_000445 |
| Nearest Ensembl: | ENSG00000178209 |
| Gene Name: | PLEC |
| Gene Alias: | EBS1 |
| Gene Description: | plectin |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.78607 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "43(GCTTAAAGAGGC,+,0.00)" |
