Difference between revisions of "TSS:Hg 243375.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000412145.5:-125 ENST00000446349.5:-125 NM_001145370:-125 NM_001145369:-125 uc004beb.2:-125 uc004bec.2:-125 BX648253:-125 |chr=chr9 |cpg_percent=0...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |PTPH1= | ||
|all_trans=ENST00000412145.5:-125 ENST00000446349.5:-125 NM_001145370:-125 NM_001145369:-125 uc004beb.2:-125 uc004bec.2:-125 BX648253:-125 | |all_trans=ENST00000412145.5:-125 ENST00000446349.5:-125 NM_001145370:-125 NM_001145369:-125 uc004beb.2:-125 uc004bec.2:-125 BX648253:-125 | ||
|chr=chr9 | |chr=chr9 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=125 | |distance_to_tss=125 | ||
|end=109451259 | |end=109451259 | ||
| + | |end_of_center_position=91101922 | ||
|entrez_id=5774 | |entrez_id=5774 | ||
|gc_percent=0.472637 | |gc_percent=0.472637 | ||
| − | |gene_alias=PTP-H1 | + | |gene_alias=PTP-H1 |
|gene_description="protein tyrosine phosphatase, non-receptor type 3" | |gene_description="protein tyrosine phosphatase, non-receptor type 3" | ||
|gene_id=5774 | |gene_id=5774 | ||
| Line 24: | Line 26: | ||
|species=human | |species=human | ||
|start=109451258 | |start=109451258 | ||
| + | |start_of_center_position=91101921 | ||
|strand=- | |strand=- | ||
|tata_box="-16(TCTTATAGAGCT,+,0.00)" | |tata_box="-16(TCTTATAGAGCT,+,0.00)" | ||
Revision as of 09:10, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 91101921 |
|---|---|
| End of the center position in the TSS region: | 91101922 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000412145.5 ENST00000446349.5 NM_001145370 NM_001145369 uc004beb.2 uc004bec.2 BX648253 |
|---|---|
| Distance: | -125 |
| Num_trans: | 7 |
| All_trans: | ENST00000412145.5:-125 ENST00000446349.5:-125 NM_001145370:-125 NM_001145369:-125 uc004beb.2:-125 uc004bec.2:-125 BX648253:-125 |
TATA-Box annotation
| Distance to TSS: | 125 |
|---|---|
| Nearest PromoterID: | NM_001145369 |
| Entrez ID: | 5774 |
| Nearest Unigene: | Hs.436429 |
| Nearest Refseq: | NM_002829 |
| Nearest Ensembl: | ENSG00000070159 |
| Gene Name: | "protein tyrosine phosphatase, non-receptor type 3" |
| Gene Alias: | PTP-H1 |
| Gene Description: | "protein tyrosine phosphatase, non-receptor type 3" |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.472637 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-16(TCTTATAGAGCT,+,0.00)" |
