Difference between revisions of "TSS:Hg 243472.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=BT007248:106 uc064wdc.1:-151 ENST00000462089.1:152 uc064wcy.1:152 ENST00000486411.1:-325 uc064wda.1:-325 |chr=chr9 |cpg_percent=0.055 |distance=106 |dis...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |SAE3= | ||
|all_trans=BT007248:106 uc064wdc.1:-151 ENST00000462089.1:152 uc064wcy.1:152 ENST00000486411.1:-325 uc064wda.1:-325 | |all_trans=BT007248:106 uc064wdc.1:-151 ENST00000462089.1:152 uc064wcy.1:152 ENST00000486411.1:-325 uc064wda.1:-325 | ||
|chr=chr9 | |chr=chr9 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=-14713 | |distance_to_tss=-14713 | ||
|end=128260666 | |end=128260666 | ||
| + | |end_of_center_position=1731 | ||
|entrez_id=375757 | |entrez_id=375757 | ||
|gc_percent=0.671642 | |gc_percent=0.671642 | ||
| − | |gene_alias=C9orf119 | + | |gene_alias=C9orf119 |
|gene_description=SWI5 homologous recombination repair protein | |gene_description=SWI5 homologous recombination repair protein | ||
|gene_id=2801 | |gene_id=2801 | ||
| Line 24: | Line 26: | ||
|species=human | |species=human | ||
|start=128260665 | |start=128260665 | ||
| + | |start_of_center_position=1730 | ||
|strand=- | |strand=- | ||
|transcript_name=BT007248 | |transcript_name=BT007248 | ||
Revision as of 16:27, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 1730 |
|---|---|
| End of the center position in the TSS region: | 1731 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BT007248 |
|---|---|
| Distance: | 106 |
| Num_trans: | 6 |
| All_trans: | BT007248:106 uc064wdc.1:-151 ENST00000462089.1:152 uc064wcy.1:152 ENST00000486411.1:-325 uc064wda.1:-325 |
TATA-Box annotation
| Distance to TSS: | -14713 |
|---|---|
| Nearest PromoterID: | NM_001318092 |
| Entrez ID: | 375757 |
| Nearest Unigene: | Hs.259594 |
| Nearest Refseq: | NM_001040011 |
| Nearest Ensembl: | ENSG00000175854 |
| Gene Name: | golgin A2 |
| Gene Alias: | C9orf119 |
| Gene Description: | SWI5 homologous recombination repair protein |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
