Difference between revisions of "TSS:Hg 10126.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=233 |entrez_id=102724552 |gc_percent=0.547264 |gene_alias=- |gene_description=uncharacterized LOC102724552 |gene_name=LOC1027245...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000488215.5:-322 uc057bzb.1:-322 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| + | |distance=-322 | ||
|distance_to_tss=233 | |distance_to_tss=233 | ||
| + | |end=8424890 | ||
|entrez_id=102724552 | |entrez_id=102724552 | ||
|gc_percent=0.547264 | |gc_percent=0.547264 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=uncharacterized LOC102724552 | |gene_description=uncharacterized LOC102724552 | ||
| − | |gene_name= | + | |gene_id=473 |
| + | |gene_name=arginine-glutamic acid dipeptide (RE) repeats | ||
| + | |gene_source=HGNC:9965 | ||
| + | |gene_symbol=RERE | ||
| + | |gene_synonyms=ARG ARP DNB1 KIAA0458 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:9965 | ||
|nearest_ensembl= | |nearest_ensembl= | ||
|nearest_promoter_id=NR_125999 | |nearest_promoter_id=NR_125999 | ||
|nearest_refseq=NR_125999 | |nearest_refseq=NR_125999 | ||
|nearest_unigene=Hs.568612 | |nearest_unigene=Hs.568612 | ||
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=8424866 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000488215.5 uc057bzb.1 | ||
| + | |tss_classification=no | ||
|tss_id=hg_10126.1 | |tss_id=hg_10126.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=K7EIQ4 | ||
}} | }} | ||
Revision as of 18:35, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000488215.5 uc057bzb.1 |
|---|---|
| Distance: | -322 |
| Num_trans: | 2 |
| All_trans: | ENST00000488215.5:-322 uc057bzb.1:-322 |
TATA-Box annotation
| Distance to TSS: | 233 |
|---|---|
| Nearest PromoterID: | NR_125999 |
| Entrez ID: | 102724552 |
| Nearest Unigene: | Hs.568612 |
| Nearest Refseq: | NR_125999 |
| Nearest Ensembl: | |
| Gene Name: | arginine-glutamic acid dipeptide (RE) repeats |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC102724552 |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.547264 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
