Difference between revisions of "TSS:Hg 243675.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK290849:-64 AF062347:81 |chr=chr9 |cpg_percent=0 |distance=-64 |distance_to_tss=915 |end=72363677 |entrez_id=7763 |gc_percent=0.323383 |gene_alias=ZA20...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |ZFAND5A= | ||
| + | |ZNF216= | ||
|all_trans=AK290849:-64 AF062347:81 | |all_trans=AK290849:-64 AF062347:81 | ||
|chr=chr9 | |chr=chr9 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=915 | |distance_to_tss=915 | ||
|end=72363677 | |end=72363677 | ||
| + | |end_of_center_position=111410079 | ||
|entrez_id=7763 | |entrez_id=7763 | ||
|gc_percent=0.323383 | |gc_percent=0.323383 | ||
| − | |gene_alias=ZA20D2 | + | |gene_alias=ZA20D2 |
|gene_description=zinc finger AN1-type containing 5 | |gene_description=zinc finger AN1-type containing 5 | ||
|gene_id=7763 | |gene_id=7763 | ||
| Line 24: | Line 27: | ||
|species=human | |species=human | ||
|start=72363676 | |start=72363676 | ||
| + | |start_of_center_position=111410078 | ||
|strand=- | |strand=- | ||
|tata_box="-71(TTTTTTAAAGAG,+,0.00),71(GCCCTGAAAAGG,-,0.00),83(AGCCTTTAAAAG,-,0.00),84(GCCTTTAAAAGT,-,0.00),85(CCTTTAAAAGTC,+,0.00)" | |tata_box="-71(TTTTTTAAAGAG,+,0.00),71(GCCCTGAAAAGG,-,0.00),83(AGCCTTTAAAAG,-,0.00),84(GCCTTTAAAAGT,-,0.00),85(CCTTTAAAAGTC,+,0.00)" | ||
Revision as of 00:21, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 111410078 |
|---|---|
| End of the center position in the TSS region: | 111410079 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK290849 |
|---|---|
| Distance: | -64 |
| Num_trans: | 2 |
| All_trans: | AK290849:-64 AF062347:81 |
TATA-Box annotation
| Distance to TSS: | 915 |
|---|---|
| Nearest PromoterID: | NM_001278243 |
| Entrez ID: | 7763 |
| Nearest Unigene: | Hs.406096 |
| Nearest Refseq: | NM_006007 |
| Nearest Ensembl: | ENSG00000107372 |
| Gene Name: | zinc finger AN1-type containing 5 |
| Gene Alias: | ZA20D2 |
| Gene Description: | zinc finger AN1-type containing 5 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.323383 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-71(TTTTTTAAAGAG,+,0.00),71(GCCCTGAAAAGG,-,0.00),83(AGCCTTTAAAAG,-,0.00),84(GCCTTTAAAAGT,-,0.00),85(CCTTTAAAAGTC,+,0.00)" |
