Difference between revisions of "TSS:Hg 243970.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK309851:-9 ENST00000621635.4:-23 NM_001287344:-23 uc010nno.3:-23 |chr=chrX |cpg_percent=0.06 |distance=-9 |distance_to_tss=23 |end=101390773 |entrez_id...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |AT= | ||
| + | |ATK= | ||
| + | |BPK= | ||
| + | |IMD1= | ||
| + | |PSCTK1= | ||
| + | |XLA= | ||
|all_trans=AK309851:-9 ENST00000621635.4:-23 NM_001287344:-23 uc010nno.3:-23 | |all_trans=AK309851:-9 ENST00000621635.4:-23 NM_001287344:-23 uc010nno.3:-23 | ||
|chr=chrX | |chr=chrX | ||
| Line 6: | Line 12: | ||
|distance_to_tss=23 | |distance_to_tss=23 | ||
|end=101390773 | |end=101390773 | ||
| + | |end_of_center_position=48801783 | ||
|entrez_id=695 | |entrez_id=695 | ||
|gc_percent=0.572139 | |gc_percent=0.572139 | ||
| − | |gene_alias=AGMX1 | + | |gene_alias=AGMX1 |
|gene_description=Bruton tyrosine kinase | |gene_description=Bruton tyrosine kinase | ||
|gene_id=695 | |gene_id=695 | ||
| Line 24: | Line 31: | ||
|species=human | |species=human | ||
|start=101390772 | |start=101390772 | ||
| + | |start_of_center_position=48801782 | ||
|strand=- | |strand=- | ||
|tata_box="-80(CCGCCTAAAGGG,-,0.00)" | |tata_box="-80(CCGCCTAAAGGG,-,0.00)" | ||
Revision as of 20:47, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 48801782 |
|---|---|
| End of the center position in the TSS region: | 48801783 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK309851 |
|---|---|
| Distance: | -9 |
| Num_trans: | 4 |
| All_trans: | AK309851:-9 ENST00000621635.4:-23 NM_001287344:-23 uc010nno.3:-23 |
TATA-Box annotation
| Distance to TSS: | 23 |
|---|---|
| Nearest PromoterID: | NM_001287344 |
| Entrez ID: | 695 |
| Nearest Unigene: | Hs.159494 |
| Nearest Refseq: | NM_000061 |
| Nearest Ensembl: | ENSG00000010671 |
| Gene Name: | Bruton tyrosine kinase |
| Gene Alias: | AGMX1 |
| Gene Description: | Bruton tyrosine kinase |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.572139 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-80(CCGCCTAAAGGG,-,0.00)" |
