Difference between revisions of "Main Page"
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The server will remain available after the restart. <br> | The server will remain available after the restart. <br> | ||
If you have any question please contact us at reftss-help<at>riken.jp .<br> | If you have any question please contact us at reftss-help<at>riken.jp .<br> | ||
| − | Thank you for using refTSS | + | Thank you for using refTSS |
</div> | </div> | ||
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| + | <div id="toc" class="toc"><div class="toctitle" lang="en" dir="ltr"><h2>Contents</h2></div> | ||
| + | <ul> | ||
| + | <li class="toclevel-1 tocsection-1"><a href="#refTSS:_reference_transcription_start_site"><span class="tocnumber">1</span> <span class="toctext">refTSS: reference transcription start site</span></a> | ||
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| + | <li class="toclevel-2 tocsection-2"><a href="#Data_files"><span class="tocnumber">1.1</span> <span class="toctext">Data files</span></a></li> | ||
| + | <li class="toclevel-2 tocsection-3"><a href="#UCSC_genome_browser_Track_Hubs"><span class="tocnumber">1.2</span> <span class="toctext">UCSC genome browser Track Hubs</span></a></li> | ||
| + | <li class="toclevel-2 tocsection-4"><a href="#Contact"><span class="tocnumber">1.3</span> <span class="toctext">Contact</span></a></li> | ||
| + | <li class="toclevel-2 tocsection-5"><a href="http://reftss.clst.riken.jp/reftss/Release_notes"><span class="tocnumber">1.4</span> <span class="toctext">Release notes</span></a></li> | ||
| + | </ul> | ||
| + | </li> | ||
| + | </ul> | ||
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= refTSS: reference transcription start site = | = refTSS: reference transcription start site = | ||
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3- [https://genome.ucsc.edu/cgi-bin/hgTracks?hubUrl=http://reftss.clst.riken.jp/trackhub/hub.txt&genome=mm10&position=lastDbPos Mouse refTSS track hub] | 3- [https://genome.ucsc.edu/cgi-bin/hgTracks?hubUrl=http://reftss.clst.riken.jp/trackhub/hub.txt&genome=mm10&position=lastDbPos Mouse refTSS track hub] | ||
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== Contact == | == Contact == | ||
Revision as of 10:13, 13 September 2021
Contents
refTSS: reference transcription start site
The refTSS is an annotated reference dataset for transcriptional start sites (TSS) in human and mouse. The dataset is generated by collecting, reprocessing and assembling various public resources.
Data files
The raw refTSS data files are available at the data download page.
UCSC genome browser Track Hubs
1- refTSS UCSC Genome Browser public track hub description pages
Contact
If you have any questions or comments, please contact to reftss-help<at>riken.jp . ("<at>" should be replaced with "@")
Please cite refTSS as:
Abugessaisa, I., Noguchi S, Hasegawa A, Kondo A, Kawaji H, Carninci P, Kasukawa T. (2019). "refTSS: A Reference Data Set for Human and Mouse Transcription Start Sites." J Mol Biol. doi: 10.1016/j.jmb.2019.04.045.
