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Difference between revisions of "TSS:Hg 3032.1"

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(Created page with "{{TSSDetail |all_trans=ENST00000419531.2:0 NR_034015:0 NR_034014:0 NR_108106:0 uc001czf.3:0 AK296298:0 AK055150:0 |chr=chr1 |cpg_percent=0.12 |distance=0 |distance_to_tss=9 |e...")
 
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|distance_to_tss=9
 
|distance_to_tss=9
 
|end=58785176
 
|end=58785176
 +
|end_of_center_position=58785160
 
|entrez_id=100131060
 
|entrez_id=100131060
 
|gc_percent=0.616915
 
|gc_percent=0.616915
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|species=human
 
|species=human
 
|start=58785143
 
|start=58785143
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|start_of_center_position=58785159
 
|strand=+
 
|strand=+
 
|transcript_name=ENST00000419531.2 NR_034015 NR_034014 NR_108106 uc001czf.3 AK296298 AK055150
 
|transcript_name=ENST00000419531.2 NR_034015 NR_034014 NR_108106 uc001czf.3 AK296298 AK055150

Revision as of 01:25, 11 May 2019

Basic information about the TSS


TSS ID:hg_3032.1
Species:human
Chr:chr1
TSS Classification:yes
Start:58785143
End:58785176
Strand:+
TSS Score:1
Start of the center position in the TSS region:58785159
End of the center position in the TSS region:58785160



Gene and protein annotation


Transcript_name:ENST00000419531.2 NR_034015 NR_034014 NR_108106 uc001czf.3 AK296298 AK055150
Distance:0
GeneID:100131060
HGNC/MGI_ID:HGNC:49450
UniProt_ID:B4DJY7
Gene_name:long intergenic non-protein coding RNA 1135
Gene_symbol:LINC01135
Gene_synonyms:
Gene_source:HGNC:49450



Transcript annotation


Transcript_name:ENST00000419531.2 NR_034015 NR_034014 NR_108106 uc001czf.3 AK296298 AK055150
Distance:0
Num_trans:7
All_trans:ENST00000419531.2:0 NR_034015:0 NR_034014:0 NR_108106:0 uc001czf.3:0 AK296298:0 AK055150:0



TATA-Box annotation


Distance to TSS:9
Nearest PromoterID:NR_034015
Entrez ID:100131060
Nearest Unigene:Hs.680604
Nearest Refseq:NR_034014
Nearest Ensembl:ENSG00000234807
Gene Name:long intergenic non-protein coding RNA 1135
Gene Alias:-
Gene Description:long intergenic non-protein coding RNA 1135
Gene Type:ncRNA
CpG%:0.12
GC%:0.616915
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):