Difference between revisions of "TSS:Hg 3076.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |NF-I/A= | ||
| + | |NF1-A= | ||
| + | |NFI-A= | ||
| + | |NFI-L= | ||
|all_trans=ENST00000403491.7:171 NM_005595:171 NM_001134673:171 uc001czw.4:171 AB037860:171 ENST00000371189.8:-248 NM_001145512:-248 uc010oos.3:-248 AK299579:-248 ENST00000479364.1:-343 uc057hbl.1:-343 AK299356:430 ENST00000371187.7:484 uc001czv.4:484 BC022264:486 | |all_trans=ENST00000403491.7:171 NM_005595:171 NM_001134673:171 uc001czw.4:171 AB037860:171 ENST00000371189.8:-248 NM_001145512:-248 uc010oos.3:-248 AK299579:-248 ENST00000479364.1:-343 uc057hbl.1:-343 AK299356:430 ENST00000371187.7:484 uc001czv.4:484 BC022264:486 | ||
|chr=chr1 | |chr=chr1 | ||
| Line 6: | Line 10: | ||
|distance_to_tss=-185 | |distance_to_tss=-185 | ||
|end=61082137 | |end=61082137 | ||
| + | |end_of_center_position=61082124 | ||
|entrez_id=4774 | |entrez_id=4774 | ||
|gc_percent=0.621891 | |gc_percent=0.621891 | ||
| − | |gene_alias=CTF | + | |gene_alias=CTF |
|gene_description=nuclear factor I A | |gene_description=nuclear factor I A | ||
|gene_id=4774 | |gene_id=4774 | ||
| Line 24: | Line 29: | ||
|species=human | |species=human | ||
|start=61082109 | |start=61082109 | ||
| + | |start_of_center_position=61082123 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000403491.7 NM_005595 NM_001134673 uc001czw.4 AB037860 | |transcript_name=ENST00000403491.7 NM_005595 NM_001134673 uc001czw.4 AB037860 | ||
Revision as of 01:31, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 61082123 |
|---|---|
| End of the center position in the TSS region: | 61082124 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000403491.7 NM_005595 NM_001134673 uc001czw.4 AB037860 |
|---|---|
| Distance: | 171 |
| Num_trans: | 15 |
| All_trans: | ENST00000403491.7:171 NM_005595:171 NM_001134673:171 uc001czw.4:171 AB037860:171 ENST00000371189.8:-248 NM_001145512:-248 uc010oos.3:-248 AK299579:-248 ENST00000479364.1:-343 uc057hbl.1:-343 AK299356:430 ENST00000371187.7:484 uc001czv.4:484 BC022264:486 |
TATA-Box annotation
| Distance to TSS: | -185 |
|---|---|
| Nearest PromoterID: | NM_005595 |
| Entrez ID: | 4774 |
| Nearest Unigene: | Hs.740757 |
| Nearest Refseq: | NM_005595 |
| Nearest Ensembl: | ENSG00000162599 |
| Gene Name: | nuclear factor I/A |
| Gene Alias: | CTF |
| Gene Description: | nuclear factor I A |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
