Difference between revisions of "TSS:Hg 11540.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.125 |distance_to_tss=216 |entrez_id=100128071 |gc_percent=0.761194 |gene_alias=- |gene_description=family with sequence similarity 229 member A |gen...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=BC111382:18 BC073915:-43 ENST00000428500.1:198 uc057ekm.1:198 ENST00000432622.1:-210 NM_001167676:-210 uc021oku.1:-210 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
| + | |distance=18 | ||
|distance_to_tss=216 | |distance_to_tss=216 | ||
| + | |end=32362033 | ||
|entrez_id=100128071 | |entrez_id=100128071 | ||
|gc_percent=0.761194 | |gc_percent=0.761194 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=family with sequence similarity 229 member A | |gene_description=family with sequence similarity 229 member A | ||
| − | |gene_name=FAM229A | + | |gene_id=100128071 |
| + | |gene_name=family with sequence similarity 229 member A | ||
| + | |gene_source=HGNC:44652 | ||
| + | |gene_symbol=FAM229A | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:44652 | ||
|nearest_ensembl=ENSG00000225828 | |nearest_ensembl=ENSG00000225828 | ||
|nearest_promoter_id=NM_001167676 | |nearest_promoter_id=NM_001167676 | ||
|nearest_refseq=NM_001167676 | |nearest_refseq=NM_001167676 | ||
|nearest_unigene=Hs.512763 | |nearest_unigene=Hs.512763 | ||
| + | |num_trans=7 | ||
| + | |species=human | ||
| + | |start=32362021 | ||
| + | |strand=- | ||
| + | |transcript_name=BC111382 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_11540.1 | |tss_id=hg_11540.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 04:41, 9 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC111382 |
|---|---|
| Distance: | 18 |
| Num_trans: | 7 |
| All_trans: | BC111382:18 BC073915:-43 ENST00000428500.1:198 uc057ekm.1:198 ENST00000432622.1:-210 NM_001167676:-210 uc021oku.1:-210 |
TATA-Box annotation
| Distance to TSS: | 216 |
|---|---|
| Nearest PromoterID: | NM_001167676 |
| Entrez ID: | 100128071 |
| Nearest Unigene: | Hs.512763 |
| Nearest Refseq: | NM_001167676 |
| Nearest Ensembl: | ENSG00000225828 |
| Gene Name: | family with sequence similarity 229 member A |
| Gene Alias: | - |
| Gene Description: | family with sequence similarity 229 member A |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.761194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
