Difference between revisions of "TSS:Hg 101352.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.045 |distance_to_tss=29 |entrez_id=54769 |gc_percent=0.59204 |gene_alias=Di-Ras2 |gene_description=DIRAS family GTPase 2 |gene_name=DIRAS2 |gene_typ...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000375765.3:-23 uc004aqx.2:-23 NM_017594:-24 AK122986:245 AK124628:271 BC008065:286 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| + | |distance=-23 | ||
|distance_to_tss=29 | |distance_to_tss=29 | ||
| + | |end=90643081 | ||
|entrez_id=54769 | |entrez_id=54769 | ||
|gc_percent=0.59204 | |gc_percent=0.59204 | ||
|gene_alias=Di-Ras2 | |gene_alias=Di-Ras2 | ||
|gene_description=DIRAS family GTPase 2 | |gene_description=DIRAS family GTPase 2 | ||
| − | |gene_name=DIRAS2 | + | |gene_id=54769 |
| + | |gene_name=DIRAS family GTP binding RAS like 2 | ||
| + | |gene_source=HGNC:19323 | ||
| + | |gene_symbol=DIRAS2 | ||
| + | |gene_synonyms=DKFZp761C07121 Di-Ras2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:19323 | ||
|nearest_ensembl=ENSG00000165023 | |nearest_ensembl=ENSG00000165023 | ||
|nearest_promoter_id=NM_017594 | |nearest_promoter_id=NM_017594 | ||
|nearest_refseq=NM_017594 | |nearest_refseq=NM_017594 | ||
|nearest_unigene=Hs.165636 | |nearest_unigene=Hs.165636 | ||
| + | |num_trans=6 | ||
| + | |species=human | ||
| + | |start=90643070 | ||
| + | |strand=- | ||
|tata_box="-63(GCACCTAAAAGC,-,0.00),-33(CGCCATTTAAGC,-,0.00),-31(CCATTTAAGCAG,+,0.00)" | |tata_box="-63(GCACCTAAAAGC,-,0.00),-33(CGCCATTTAAGC,-,0.00),-31(CCATTTAAGCAG,+,0.00)" | ||
| + | |transcript_name=ENST00000375765.3 uc004aqx.2 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101352.1 | |tss_id=hg_101352.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q96HU8 | ||
}} | }} | ||
Revision as of 18:39, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000375765.3 uc004aqx.2 |
|---|---|
| Distance: | -23 |
| Num_trans: | 6 |
| All_trans: | ENST00000375765.3:-23 uc004aqx.2:-23 NM_017594:-24 AK122986:245 AK124628:271 BC008065:286 |
TATA-Box annotation
| Distance to TSS: | 29 |
|---|---|
| Nearest PromoterID: | NM_017594 |
| Entrez ID: | 54769 |
| Nearest Unigene: | Hs.165636 |
| Nearest Refseq: | NM_017594 |
| Nearest Ensembl: | ENSG00000165023 |
| Gene Name: | DIRAS family GTP binding RAS like 2 |
| Gene Alias: | Di-Ras2 |
| Gene Description: | DIRAS family GTPase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-63(GCACCTAAAAGC,-,0.00),-33(CGCCATTTAAGC,-,0.00),-31(CCATTTAAGCAG,+,0.00)" |
