Difference between revisions of "TSS:Hg 101367.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=44258 |entrez_id=100129347 |gc_percent=0.467662 |gene_alias=C9orf73 |gene_description=long intergenic non-protein coding RNA 484...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000457976.1:229 uc064ufs.1:229 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| + | |distance=229 | ||
|distance_to_tss=44258 | |distance_to_tss=44258 | ||
| + | |end=91163324 | ||
|entrez_id=100129347 | |entrez_id=100129347 | ||
|gc_percent=0.467662 | |gc_percent=0.467662 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NR_135306 | |nearest_refseq=NR_135306 | ||
|nearest_unigene=Hs.522287 | |nearest_unigene=Hs.522287 | ||
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=91163315 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000457976.1 uc064ufs.1 | ||
| + | |tss_classification=no | ||
|tss_id=hg_101367.1 | |tss_id=hg_101367.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 18:40, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000457976.1 uc064ufs.1 |
|---|---|
| Distance: | 229 |
| Num_trans: | 2 |
| All_trans: | ENST00000457976.1:229 uc064ufs.1:229 |
TATA-Box annotation
| Distance to TSS: | 44258 |
|---|---|
| Nearest PromoterID: | NR_135306 |
| Entrez ID: | 100129347 |
| Nearest Unigene: | Hs.522287 |
| Nearest Refseq: | NR_135306 |
| Nearest Ensembl: | ENSG00000229694 |
| Gene Name: | LINC00484 |
| Gene Alias: | C9orf73 |
| Gene Description: | long intergenic non-protein coding RNA 484 |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.467662 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
