Difference between revisions of "TSS:Hg 35988.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK057559:48 ENST00000428373.5:-57 uc003cfz.5:-57 BC041385:-57 NM_001267616:-472 |chr=chr3 |cpg_percent=0.05 |distance=48 |distance_to_tss=477 |end=35639...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |R3HDM3= | ||
| + | |RCS= | ||
| + | |TARPP= | ||
|all_trans=AK057559:48 ENST00000428373.5:-57 uc003cfz.5:-57 BC041385:-57 NM_001267616:-472 | |all_trans=AK057559:48 ENST00000428373.5:-57 uc003cfz.5:-57 BC041385:-57 NM_001267616:-472 | ||
|chr=chr3 | |chr=chr3 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=477 | |distance_to_tss=477 | ||
|end=35639656 | |end=35639656 | ||
| + | |end_of_center_position=35639651 | ||
|entrez_id=10777 | |entrez_id=10777 | ||
|gc_percent=0.606965 | |gc_percent=0.606965 | ||
| − | |gene_alias=ARPP-21 | + | |gene_alias=ARPP-21 |
|gene_description=cAMP regulated phosphoprotein 21 | |gene_description=cAMP regulated phosphoprotein 21 | ||
|gene_id=100130503 | |gene_id=100130503 | ||
| Line 24: | Line 28: | ||
|species=human | |species=human | ||
|start=35639645 | |start=35639645 | ||
| + | |start_of_center_position=35639650 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK057559 | |transcript_name=AK057559 | ||
Revision as of 01:43, 13 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 35639650 |
|---|---|
| End of the center position in the TSS region: | 35639651 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK057559 |
|---|---|
| Distance: | 48 |
| Num_trans: | 5 |
| All_trans: | AK057559:48 ENST00000428373.5:-57 uc003cfz.5:-57 BC041385:-57 NM_001267616:-472 |
TATA-Box annotation
| Distance to TSS: | 477 |
|---|---|
| Nearest PromoterID: | NM_001267616 |
| Entrez ID: | 10777 |
| Nearest Unigene: | Hs.475902 |
| Nearest Refseq: | NM_016300 |
| Nearest Ensembl: | ENSG00000172995 |
| Gene Name: | uncharacterized LOC100130503 |
| Gene Alias: | ARPP-21 |
| Gene Description: | cAMP regulated phosphoprotein 21 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.606965 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
