Difference between revisions of "TSS:Hg 101396.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.135 |distance_to_tss=35 |entrez_id=4920 |gc_percent=0.726368 |gene_alias=BDB|BDB1|NTRKR2 |gene_description=receptor tyrosine kinase like orphan rece...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |BDB1= | ||
| + | |NTRKR2= | ||
| + | |all_trans=ENST00000375708.3:-30 NM_004560:-30 NM_001318204:-30 uc004arj.3:-30 M97639:-30 BC126454:72 BC130522:72 BC051273:148 ENST00000476440.1:216 uc064ugi.1:216 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
| + | |distance=-30 | ||
|distance_to_tss=35 | |distance_to_tss=35 | ||
| + | |end=91950132 | ||
|entrez_id=4920 | |entrez_id=4920 | ||
|gc_percent=0.726368 | |gc_percent=0.726368 | ||
|gene_alias=BDB|BDB1|NTRKR2 | |gene_alias=BDB|BDB1|NTRKR2 | ||
|gene_description=receptor tyrosine kinase like orphan receptor 2 | |gene_description=receptor tyrosine kinase like orphan receptor 2 | ||
| − | |gene_name=ROR2 | + | |gene_id=4920 |
| + | |gene_name=receptor tyrosine kinase like orphan receptor 2 | ||
| + | |gene_source=HGNC:10257 | ||
| + | |gene_symbol=ROR2 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:10257 | ||
|nearest_ensembl=ENSG00000169071 | |nearest_ensembl=ENSG00000169071 | ||
|nearest_promoter_id=NM_004560 | |nearest_promoter_id=NM_004560 | ||
|nearest_refseq=NM_004560 | |nearest_refseq=NM_004560 | ||
|nearest_unigene=Hs.98255 | |nearest_unigene=Hs.98255 | ||
| + | |num_trans=10 | ||
| + | |species=human | ||
| + | |start=91950121 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000375708.3 NM_004560 NM_001318204 uc004arj.3 M97639 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101396.1 | |tss_id=hg_101396.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q01974 | ||
}} | }} | ||
Revision as of 18:41, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000375708.3 NM_004560 NM_001318204 uc004arj.3 M97639 |
|---|---|
| Distance: | -30 |
| Num_trans: | 10 |
| All_trans: | ENST00000375708.3:-30 NM_004560:-30 NM_001318204:-30 uc004arj.3:-30 M97639:-30 BC126454:72 BC130522:72 BC051273:148 ENST00000476440.1:216 uc064ugi.1:216 |
TATA-Box annotation
| Distance to TSS: | 35 |
|---|---|
| Nearest PromoterID: | NM_004560 |
| Entrez ID: | 4920 |
| Nearest Unigene: | Hs.98255 |
| Nearest Refseq: | NM_004560 |
| Nearest Ensembl: | ENSG00000169071 |
| Gene Name: | receptor tyrosine kinase like orphan receptor 2 |
| Gene Alias: | BDB |
| Gene Description: | receptor tyrosine kinase like orphan receptor 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.726368 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
