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Difference between revisions of "TSS:Hg 46193.1"

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(Created page with "{{TSSDetail |all_trans=ENST00000429578.5:0 ENST00000414120.1:0 NR_024480:0 uc003ftr.3:0 uc062ror.1:0 AK054628:0 ENST00000456816.5:85 uc062roq.1:85 BC112168:151 BC113537:151 |c...")
 
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|distance_to_tss=4
 
|distance_to_tss=4
 
|end=194312811
 
|end=194312811
 +
|end_of_center_position=194312800
 
|entrez_id=100131551
 
|entrez_id=100131551
 
|gc_percent=0.542289
 
|gc_percent=0.542289
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|species=human
 
|species=human
 
|start=194312788
 
|start=194312788
 +
|start_of_center_position=194312799
 
|strand=-
 
|strand=-
 
|transcript_name=ENST00000429578.5 ENST00000414120.1 NR_024480 uc003ftr.3 uc062ror.1 AK054628
 
|transcript_name=ENST00000429578.5 ENST00000414120.1 NR_024480 uc003ftr.3 uc062ror.1 AK054628

Revision as of 13:43, 13 May 2019

Basic information about the TSS


TSS ID:hg_46193.1
Species:human
Chr:chr3
TSS Classification:yes
Start:194312788
End:194312811
Strand:-
TSS Score:1
Start of the center position in the TSS region:194312799
End of the center position in the TSS region:194312800



Gene and protein annotation


Transcript_name:ENST00000429578.5 ENST00000414120.1 NR_024480 uc003ftr.3 uc062ror.1 AK054628
Distance:0
GeneID:100131551
HGNC/MGI_ID:HGNC:48574
UniProt_ID:
Gene_name:long intergenic non-protein coding RNA 887
Gene_symbol:LINC00887
Gene_synonyms:linc-ATP13A4-8
Gene_source:HGNC:48574



Transcript annotation


Transcript_name:ENST00000429578.5 ENST00000414120.1 NR_024480 uc003ftr.3 uc062ror.1 AK054628
Distance:0
Num_trans:10
All_trans:ENST00000429578.5:0 ENST00000414120.1:0 NR_024480:0 uc003ftr.3:0 uc062ror.1:0 AK054628:0 ENST00000456816.5:85 uc062roq.1:85 BC112168:151 BC113537:151



TATA-Box annotation


Distance to TSS:4
Nearest PromoterID:NR_024480
Entrez ID:100131551
Nearest Unigene:Hs.128066
Nearest Refseq:NR_024480
Nearest Ensembl:ENSG00000214145
Gene Name:long intergenic non-protein coding RNA 887
Gene Alias:HEIRCC
Gene Description:long intergenic non-protein coding RNA 887
Gene Type:ncRNA
CpG%:0.03
GC%:0.542289
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):