Difference between revisions of "TSS:Hg 49423.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000602414.5:-9 ENST00000602520.5:-9 uc003iby.4:-9 uc021xra.2:-9 ENST00000602483.5:20 uc062zfe.1:20 ENST00000602819.5:23 uc021xqz.2:23 BC017993:24...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |NCRNA00060= | ||
|all_trans=ENST00000602414.5:-9 ENST00000602520.5:-9 uc003iby.4:-9 uc021xra.2:-9 ENST00000602483.5:20 uc062zfe.1:20 ENST00000602819.5:23 uc021xqz.2:23 BC017993:24 NR_034011:27 NR_034010:27 NR_003584:27 BC039555:39 ENST00000602573.1:325 uc062zff.1:325 | |all_trans=ENST00000602414.5:-9 ENST00000602520.5:-9 uc003iby.4:-9 uc021xra.2:-9 ENST00000602483.5:20 uc062zfe.1:20 ENST00000602819.5:23 uc021xqz.2:23 BC017993:24 NR_034011:27 NR_034010:27 NR_003584:27 BC039555:39 ENST00000602573.1:325 uc062zff.1:325 | ||
|chr=chr4 | |chr=chr4 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=-36 | |distance_to_tss=-36 | ||
|end=118278735 | |end=118278735 | ||
| + | |end_of_center_position=118278727 | ||
|entrez_id=100093630 | |entrez_id=100093630 | ||
|gc_percent=0.577114 | |gc_percent=0.577114 | ||
| − | |gene_alias=LINC00060 | + | |gene_alias=LINC00060 |
|gene_description=small nucleolar RNA host gene 8 | |gene_description=small nucleolar RNA host gene 8 | ||
|gene_id=100093630 | |gene_id=100093630 | ||
| Line 24: | Line 26: | ||
|species=human | |species=human | ||
|start=118278717 | |start=118278717 | ||
| + | |start_of_center_position=118278726 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000602414.5 ENST00000602520.5 uc003iby.4 uc021xra.2 | |transcript_name=ENST00000602414.5 ENST00000602520.5 uc003iby.4 uc021xra.2 | ||
Revision as of 21:39, 13 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 118278726 |
|---|---|
| End of the center position in the TSS region: | 118278727 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000602414.5 ENST00000602520.5 uc003iby.4 uc021xra.2 |
|---|---|
| Distance: | -9 |
| Num_trans: | 15 |
| All_trans: | ENST00000602414.5:-9 ENST00000602520.5:-9 uc003iby.4:-9 uc021xra.2:-9 ENST00000602483.5:20 uc062zfe.1:20 ENST00000602819.5:23 uc021xqz.2:23 BC017993:24 NR_034011:27 NR_034010:27 NR_003584:27 BC039555:39 ENST00000602573.1:325 uc062zff.1:325 |
TATA-Box annotation
| Distance to TSS: | -36 |
|---|---|
| Nearest PromoterID: | NR_003584 |
| Entrez ID: | 100093630 |
| Nearest Unigene: | Hs.535762 |
| Nearest Refseq: | NR_003584 |
| Nearest Ensembl: | ENSG00000269893 |
| Gene Name: | small nucleolar RNA host gene 8 |
| Gene Alias: | LINC00060 |
| Gene Description: | small nucleolar RNA host gene 8 |
| Gene Type: | ncRNA |
| CpG%: | 0.1 |
| GC%: | 0.577114 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
