Difference between revisions of "TSS:Hg 53378.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000394833.6:-56 uc003hwb.2:-56 AB040120:-56 NM_022154:-108 ENST00000424970.6:-122 uc011ceo.2:-122 AK304274:-122 NM_001135147:-170 ENST00000514000....") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CDG2N= | ||
| + | |LZT-Hs6= | ||
| + | |PP3105= | ||
| + | |ZIP8= | ||
|all_trans=ENST00000394833.6:-56 uc003hwb.2:-56 AB040120:-56 NM_022154:-108 ENST00000424970.6:-122 uc011ceo.2:-122 AK304274:-122 NM_001135147:-170 ENST00000514000.5:-354 uc062yoa.1:-354 AF193052:-366 ENST00000356736.4:-391 uc003hwc.3:-391 BC012125:-391 ENST00000512657.5:-399 uc062yob.1:-399 DQ892212:401 KJ894532:401 DQ895407:401 CU680230:401 NM_001135146:-415 | |all_trans=ENST00000394833.6:-56 uc003hwb.2:-56 AB040120:-56 NM_022154:-108 ENST00000424970.6:-122 uc011ceo.2:-122 AK304274:-122 NM_001135147:-170 ENST00000514000.5:-354 uc062yoa.1:-354 AF193052:-366 ENST00000356736.4:-391 uc003hwc.3:-391 BC012125:-391 ENST00000512657.5:-399 uc062yob.1:-399 DQ892212:401 KJ894532:401 DQ895407:401 CU680230:401 NM_001135146:-415 | ||
|chr=chr4 | |chr=chr4 | ||
| Line 6: | Line 10: | ||
|distance_to_tss=118 | |distance_to_tss=118 | ||
|end=102345083 | |end=102345083 | ||
| + | |end_of_center_position=102345073 | ||
|entrez_id=64116 | |entrez_id=64116 | ||
|gc_percent=0.562189 | |gc_percent=0.562189 | ||
| − | |gene_alias=BIGM103 | + | |gene_alias=BIGM103 |
|gene_description=solute carrier family 39 member 8 | |gene_description=solute carrier family 39 member 8 | ||
|gene_id=64116 | |gene_id=64116 | ||
| Line 24: | Line 29: | ||
|species=human | |species=human | ||
|start=102345062 | |start=102345062 | ||
| + | |start_of_center_position=102345072 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000394833.6 uc003hwb.2 AB040120 | |transcript_name=ENST00000394833.6 uc003hwb.2 AB040120 | ||
Revision as of 20:45, 13 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 102345072 |
|---|---|
| End of the center position in the TSS region: | 102345073 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000394833.6 uc003hwb.2 AB040120 |
|---|---|
| Distance: | -56 |
| Num_trans: | 21 |
| All_trans: | ENST00000394833.6:-56 uc003hwb.2:-56 AB040120:-56 NM_022154:-108 ENST00000424970.6:-122 uc011ceo.2:-122 AK304274:-122 NM_001135147:-170 ENST00000514000.5:-354 uc062yoa.1:-354 AF193052:-366 ENST00000356736.4:-391 uc003hwc.3:-391 BC012125:-391 ENST00000512657.5:-399 uc062yob.1:-399 DQ892212:401 KJ894532:401 DQ895407:401 CU680230:401 NM_001135146:-415 |
TATA-Box annotation
| Distance to TSS: | 118 |
|---|---|
| Nearest PromoterID: | NM_022154 |
| Entrez ID: | 64116 |
| Nearest Unigene: | Hs.288034 |
| Nearest Refseq: | NM_022154 |
| Nearest Ensembl: | ENSG00000138821 |
| Gene Name: | solute carrier family 39 member 8 |
| Gene Alias: | BIGM103 |
| Gene Description: | solute carrier family 39 member 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.562189 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
