Difference between revisions of "TSS:Hg 101589.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.07 |distance_to_tss=-6188 |entrez_id=100188953 |gc_percent=0.641791 |gene_alias=NCRNA00092|bA346B7.1 |gene_description=long intergenic non-protein c...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000583864.1:-12 uc064unw.1:-12 ENST00000580908.1:-17 uc064unx.1:-17 | ||
| + | |bA346B7.1= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
| + | |distance=-12 | ||
|distance_to_tss=-6188 | |distance_to_tss=-6188 | ||
| + | |end=96027948 | ||
|entrez_id=100188953 | |entrez_id=100188953 | ||
|gc_percent=0.641791 | |gc_percent=0.641791 | ||
|gene_alias=NCRNA00092|bA346B7.1 | |gene_alias=NCRNA00092|bA346B7.1 | ||
|gene_description=long intergenic non-protein coding RNA 92 | |gene_description=long intergenic non-protein coding RNA 92 | ||
| − | |gene_name=LINC00092 | + | |gene_id=100188953 |
| + | |gene_name=long intergenic non-protein coding RNA 92 | ||
| + | |gene_source=HGNC:31408 | ||
| + | |gene_symbol=LINC00092 | ||
| + | |gene_synonyms=bA346B7.1 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:31408 | ||
|nearest_ensembl=ENSG00000225194 | |nearest_ensembl=ENSG00000225194 | ||
|nearest_promoter_id=NR_024129 | |nearest_promoter_id=NR_024129 | ||
|nearest_refseq=NR_024129 | |nearest_refseq=NR_024129 | ||
|nearest_unigene=Hs.434310 | |nearest_unigene=Hs.434310 | ||
| + | |num_trans=4 | ||
| + | |species=human | ||
| + | |start=96027938 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000583864.1 uc064unw.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101589.1 | |tss_id=hg_101589.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 18:50, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000583864.1 uc064unw.1 |
|---|---|
| Distance: | -12 |
| Num_trans: | 4 |
| All_trans: | ENST00000583864.1:-12 uc064unw.1:-12 ENST00000580908.1:-17 uc064unx.1:-17 |
TATA-Box annotation
| Distance to TSS: | -6188 |
|---|---|
| Nearest PromoterID: | NR_024129 |
| Entrez ID: | 100188953 |
| Nearest Unigene: | Hs.434310 |
| Nearest Refseq: | NR_024129 |
| Nearest Ensembl: | ENSG00000225194 |
| Gene Name: | long intergenic non-protein coding RNA 92 |
| Gene Alias: | NCRNA00092 |
| Gene Description: | long intergenic non-protein coding RNA 92 |
| Gene Type: | ncRNA |
| CpG%: | 0.07 |
| GC%: | 0.641791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
