Difference between revisions of "TSS:Hg 63882.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000513454.5:0 ENST00000311337.10:0 ENST00000500692.6:0 ENST00000504139.5:0 ENST00000503229.5:0 ENST00000507107.1:0 uc063idv.1:0 uc010jgh.4:0 uc063...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |GNPDA= | ||
| + | |GNPI= | ||
| + | |GPI= | ||
| + | |HLN= | ||
|all_trans=ENST00000513454.5:0 ENST00000311337.10:0 ENST00000500692.6:0 ENST00000504139.5:0 ENST00000503229.5:0 ENST00000507107.1:0 uc063idv.1:0 uc010jgh.4:0 uc063idw.1:0 uc063idx.1:0 uc063iec.1:0 uc063ied.1:0 BC022322:0 AK022779:0 AK296452:0 BC020769:0 ENST00000505689.5:-6 uc063idy.1:-6 AK290686:11 NM_005471:-20 ENST00000510194.5:24 ENST00000504424.1:24 uc063ieb.1:24 uc063iee.1:24 ENST00000503794.5:47 uc003lmg.5:47 D31766:47 ENST00000508177.5:226 uc003lmf.5:226 AJ002231:226 | |all_trans=ENST00000513454.5:0 ENST00000311337.10:0 ENST00000500692.6:0 ENST00000504139.5:0 ENST00000503229.5:0 ENST00000507107.1:0 uc063idv.1:0 uc010jgh.4:0 uc063idw.1:0 uc063idx.1:0 uc063iec.1:0 uc063ied.1:0 BC022322:0 AK022779:0 AK296452:0 BC020769:0 ENST00000505689.5:-6 uc063idy.1:-6 AK290686:11 NM_005471:-20 ENST00000510194.5:24 ENST00000504424.1:24 uc063ieb.1:24 uc063iee.1:24 ENST00000503794.5:47 uc003lmg.5:47 D31766:47 ENST00000508177.5:226 uc003lmf.5:226 AJ002231:226 | ||
|chr=chr5 | |chr=chr5 | ||
| Line 6: | Line 10: | ||
|distance_to_tss=28 | |distance_to_tss=28 | ||
|end=142013035 | |end=142013035 | ||
| + | |end_of_center_position=142013028 | ||
|entrez_id=10007 | |entrez_id=10007 | ||
|gc_percent=0.79602 | |gc_percent=0.79602 | ||
| − | |gene_alias=GNP1 | + | |gene_alias=GNP1 |
|gene_description=glucosamine-6-phosphate deaminase 1 | |gene_description=glucosamine-6-phosphate deaminase 1 | ||
|gene_id=10007 | |gene_id=10007 | ||
| Line 24: | Line 29: | ||
|species=human | |species=human | ||
|start=142013019 | |start=142013019 | ||
| + | |start_of_center_position=142013027 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000513454.5 ENST00000311337.10 ENST00000500692.6 ENST00000504139.5 ENST00000503229.5 ENST00000507107.1 uc063idv.1 uc010jgh.4 uc063idw.1 uc063idx.1 uc063iec.1 uc063ied.1 BC022322 AK022779 AK296452 BC020769 | |transcript_name=ENST00000513454.5 ENST00000311337.10 ENST00000500692.6 ENST00000504139.5 ENST00000503229.5 ENST00000507107.1 uc063idv.1 uc010jgh.4 uc063idw.1 uc063idx.1 uc063iec.1 uc063ied.1 BC022322 AK022779 AK296452 BC020769 | ||
Revision as of 10:53, 14 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 142013027 |
|---|---|
| End of the center position in the TSS region: | 142013028 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000513454.5 ENST00000311337.10 ENST00000500692.6 ENST00000504139.5 ENST00000503229.5 ENST00000507107.1 uc063idv.1 uc010jgh.4 uc063idw.1 uc063idx.1 uc063iec.1 uc063ied.1 BC022322 AK022779 AK296452 BC020769 |
|---|---|
| Distance: | 0 |
| Num_trans: | 30 |
| All_trans: | ENST00000513454.5:0 ENST00000311337.10:0 ENST00000500692.6:0 ENST00000504139.5:0 ENST00000503229.5:0 ENST00000507107.1:0 uc063idv.1:0 uc010jgh.4:0 uc063idw.1:0 uc063idx.1:0 uc063iec.1:0 uc063ied.1:0 BC022322:0 AK022779:0 AK296452:0 BC020769:0 ENST00000505689.5:-6 uc063idy.1:-6 AK290686:11 NM_005471:-20 ENST00000510194.5:24 ENST00000504424.1:24 uc063ieb.1:24 uc063iee.1:24 ENST00000503794.5:47 uc003lmg.5:47 D31766:47 ENST00000508177.5:226 uc003lmf.5:226 AJ002231:226 |
TATA-Box annotation
| Distance to TSS: | 28 |
|---|---|
| Nearest PromoterID: | NM_005471 |
| Entrez ID: | 10007 |
| Nearest Unigene: | Hs.633853 |
| Nearest Refseq: | NM_005471 |
| Nearest Ensembl: | ENSG00000113552 |
| Gene Name: | glucosamine-6-phosphate deaminase 1 |
| Gene Alias: | GNP1 |
| Gene Description: | glucosamine-6-phosphate deaminase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.165 |
| GC%: | 0.79602 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
