Difference between revisions of "TSS:Hg 118995.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.04 |distance_to_tss=272 |entrez_id=100126784 |gc_percent=0.577114 |gene_alias=- |gene_description=uncharacterized LOC100126784 |gene_name=LOC1001267...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=BC029949:-160 BC035903:-168 NR_015384:-269 | ||
| + | |chr=chr11 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
| + | |distance=-160 | ||
|distance_to_tss=272 | |distance_to_tss=272 | ||
| + | |end=19714403 | ||
|entrez_id=100126784 | |entrez_id=100126784 | ||
|gc_percent=0.577114 | |gc_percent=0.577114 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=uncharacterized LOC100126784 | |gene_description=uncharacterized LOC100126784 | ||
| − | |gene_name=LOC100126784 | + | |gene_id=100126784 |
| + | |gene_name=uncharacterized LOC100126784 | ||
| + | |gene_source=EntrezGene:100126784 | ||
| + | |gene_symbol=LOC100126784 | ||
| + | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id= | ||
|nearest_ensembl= | |nearest_ensembl= | ||
|nearest_promoter_id=NR_015384 | |nearest_promoter_id=NR_015384 | ||
|nearest_refseq=NR_015384 | |nearest_refseq=NR_015384 | ||
|nearest_unigene=Hs.64341 | |nearest_unigene=Hs.64341 | ||
| + | |num_trans=3 | ||
| + | |species=human | ||
| + | |start=19714396 | ||
| + | |strand=- | ||
| + | |transcript_name=BC029949 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_118995.1 | |tss_id=hg_118995.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 07:14, 9 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC029949 |
|---|---|
| Distance: | -160 |
| Num_trans: | 3 |
| All_trans: | BC029949:-160 BC035903:-168 NR_015384:-269 |
TATA-Box annotation
| Distance to TSS: | 272 |
|---|---|
| Nearest PromoterID: | NR_015384 |
| Entrez ID: | 100126784 |
| Nearest Unigene: | Hs.64341 |
| Nearest Refseq: | NR_015384 |
| Nearest Ensembl: | |
| Gene Name: | uncharacterized LOC100126784 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC100126784 |
| Gene Type: | ncRNA |
| CpG%: | 0.04 |
| GC%: | 0.577114 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
