Difference between revisions of "TSS:Hg 101700.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.145 |distance_to_tss=44 |entrez_id=9568 |gc_percent=0.80597 |gene_alias=GABABR2|GPR51|GPRC3B|HG20|HRIHFB2099 |gene_description=gamma-aminobutyric ac...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |GPR51= | ||
| + | |GPRC3B= | ||
| + | |HG20= | ||
| + | |HRIHFB2099= | ||
| + | |all_trans=ENST00000259455.3:-40 NM_005458:-40 uc004ays.4:-40 AF056085:-40 BC035071:-97 AF069755:256 AF095784:338 AB384741:411 AF099033:412 AF074483:412 AJ012188:412 JQ308173:412 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
| + | |distance=-40 | ||
|distance_to_tss=44 | |distance_to_tss=44 | ||
| + | |end=98709157 | ||
|entrez_id=9568 | |entrez_id=9568 | ||
|gc_percent=0.80597 | |gc_percent=0.80597 | ||
|gene_alias=GABABR2|GPR51|GPRC3B|HG20|HRIHFB2099 | |gene_alias=GABABR2|GPR51|GPRC3B|HG20|HRIHFB2099 | ||
|gene_description=gamma-aminobutyric acid type B receptor subunit 2 | |gene_description=gamma-aminobutyric acid type B receptor subunit 2 | ||
| − | |gene_name=GABBR2 | + | |gene_id=9568 |
| + | |gene_name=gamma-aminobutyric acid type B receptor subunit 2 | ||
| + | |gene_source=HGNC:4507 | ||
| + | |gene_symbol=GABBR2 | ||
| + | |gene_synonyms=GABABR2 GPRC3B HG20 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:4507 | ||
|nearest_ensembl=ENSG00000136928 | |nearest_ensembl=ENSG00000136928 | ||
|nearest_promoter_id=NM_005458 | |nearest_promoter_id=NM_005458 | ||
|nearest_refseq=NM_005458 | |nearest_refseq=NM_005458 | ||
|nearest_unigene=Hs.198612 | |nearest_unigene=Hs.198612 | ||
| + | |num_trans=12 | ||
| + | |species=human | ||
| + | |start=98709148 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000259455.3 NM_005458 uc004ays.4 AF056085 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101700.1 | |tss_id=hg_101700.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=H9NIL8 O75899 | ||
}} | }} | ||
Revision as of 18:54, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000259455.3 NM_005458 uc004ays.4 AF056085 |
|---|---|
| Distance: | -40 |
| Num_trans: | 12 |
| All_trans: | ENST00000259455.3:-40 NM_005458:-40 uc004ays.4:-40 AF056085:-40 BC035071:-97 AF069755:256 AF095784:338 AB384741:411 AF099033:412 AF074483:412 AJ012188:412 JQ308173:412 |
TATA-Box annotation
| Distance to TSS: | 44 |
|---|---|
| Nearest PromoterID: | NM_005458 |
| Entrez ID: | 9568 |
| Nearest Unigene: | Hs.198612 |
| Nearest Refseq: | NM_005458 |
| Nearest Ensembl: | ENSG00000136928 |
| Gene Name: | gamma-aminobutyric acid type B receptor subunit 2 |
| Gene Alias: | GABABR2 |
| Gene Description: | gamma-aminobutyric acid type B receptor subunit 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.80597 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
