Difference between revisions of "TSS:Hg 101708.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=6865 |entrez_id=100996569 |gc_percent=0.437811 |gene_alias=- |gene_description="non-protein coding RNA, associated with MAP kin...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=DQ673961:-447 DQ673975:-460 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| + | |distance=-447 | ||
|distance_to_tss=6865 | |distance_to_tss=6865 | ||
| + | |end=99368407 | ||
|entrez_id=100996569 | |entrez_id=100996569 | ||
|gc_percent=0.437811 | |gc_percent=0.437811 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NR_102270 | |nearest_refseq=NR_102270 | ||
|nearest_unigene=Hs.745280 | |nearest_unigene=Hs.745280 | ||
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=99368377 | ||
| + | |strand=- | ||
| + | |transcript_name=DQ673961 | ||
| + | |tss_classification=no | ||
|tss_id=hg_101708.1 | |tss_id=hg_101708.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 18:55, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | DQ673961 |
|---|---|
| Distance: | -447 |
| Num_trans: | 2 |
| All_trans: | DQ673961:-447 DQ673975:-460 |
TATA-Box annotation
| Distance to TSS: | 6865 |
|---|---|
| Nearest PromoterID: | NR_102270 |
| Entrez ID: | 100996569 |
| Nearest Unigene: | Hs.745280 |
| Nearest Refseq: | NR_102270 |
| Nearest Ensembl: | ENSG00000271086 |
| Gene Name: | NAMA |
| Gene Alias: | - |
| Gene Description: | "non-protein coding RNA, associated with MAP kinase pathway and growth arrest" |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.437811 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
