Difference between revisions of "TSS:Hg 101718.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.075 |distance_to_tss=392 |entrez_id=101928438 |gc_percent=0.631841 |gene_alias=- |gene_description=uncharacterized LOC101928438 |gene_name=LOC101928...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000427039.1:-386 NR_109802:-386 uc004bad.1:-386 AK057451:-386 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| + | |distance=-386 | ||
|distance_to_tss=392 | |distance_to_tss=392 | ||
| + | |end=99819503 | ||
|entrez_id=101928438 | |entrez_id=101928438 | ||
|gc_percent=0.631841 | |gc_percent=0.631841 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=uncharacterized LOC101928438 | |gene_description=uncharacterized LOC101928438 | ||
| − | |gene_name=LOC101928438 | + | |gene_id=101928438 |
| + | |gene_name=uncharacterized LOC101928438 | ||
| + | |gene_source=EntrezGene:101928438 | ||
| + | |gene_symbol=LOC101928438 | ||
| + | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id= | ||
|nearest_ensembl=ENSG00000237461 | |nearest_ensembl=ENSG00000237461 | ||
|nearest_promoter_id=NR_109802 | |nearest_promoter_id=NR_109802 | ||
|nearest_refseq=NR_109802 | |nearest_refseq=NR_109802 | ||
|nearest_unigene=Hs.637767 | |nearest_unigene=Hs.637767 | ||
| + | |num_trans=4 | ||
| + | |species=human | ||
| + | |start=99819491 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000427039.1 NR_109802 uc004bad.1 AK057451 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101718.1 | |tss_id=hg_101718.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 18:55, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000427039.1 NR_109802 uc004bad.1 AK057451 |
|---|---|
| Distance: | -386 |
| Num_trans: | 4 |
| All_trans: | ENST00000427039.1:-386 NR_109802:-386 uc004bad.1:-386 AK057451:-386 |
TATA-Box annotation
| Distance to TSS: | 392 |
|---|---|
| Nearest PromoterID: | NR_109802 |
| Entrez ID: | 101928438 |
| Nearest Unigene: | Hs.637767 |
| Nearest Refseq: | NR_109802 |
| Nearest Ensembl: | ENSG00000237461 |
| Gene Name: | uncharacterized LOC101928438 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC101928438 |
| Gene Type: | ncRNA |
| CpG%: | 0.075 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
