Difference between revisions of "Template:TSSDetail"
From referenceTSS
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</style> | </style> | ||
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<span class="section_head">Basic information about the TSS</span> | <span class="section_head">Basic information about the TSS</span> | ||
<hr width="370px" size="2" style="text-align:left;margin-left:0" noshade> | <hr width="370px" size="2" style="text-align:left;margin-left:0" noshade> | ||
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<div style="width:42%; float:left;"> | <div style="width:42%; float:left;"> | ||
<table class="inner" > | <table class="inner" > | ||
| − | <tr><th scope="row" class="item_label">TSS ID:</th><td>[[Tss id::{{{tss_id}}}|]]</td></tr> | + | <tr><th scope="row" class="item_label">TSS ID:</th><td></html>[[Tss id::{{{tss_id}}}|]]<html></td></tr> |
<tr><th scope="row" class="item_label">Species:</th><td>{{{species}}}</td></tr> | <tr><th scope="row" class="item_label">Species:</th><td>{{{species}}}</td></tr> | ||
<tr><th scope="row" class="item_label">Chr:</th><td>{{{chr}}}</td></tr> | <tr><th scope="row" class="item_label">Chr:</th><td>{{{chr}}}</td></tr> | ||
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<tr><th scope="row" class="item_label_long">TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):</th><td class="ttb">{{{tata_box}}}</td></tr> | <tr><th scope="row" class="item_label_long">TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):</th><td class="ttb">{{{tata_box}}}</td></tr> | ||
</table> | </table> | ||
| − | + | </html> | |
| − | {{#set: | + | {{#set:Tss id={{{|tss_id}}}}} |
Revision as of 11:35, 7 March 2018
Basic information about the TSS
|
Gene and protein annotation
|
Transcript annotation
| Transcript_name: | {{{transcript_name}}} |
|---|---|
| Distance: | {{{distance}}} |
| Num_trans: | {{{num_trans}}} |
| All_trans: | :{{{all_trans}}} |
TATA-Box annotation
| Distance to TSS: | {{{distance_to_tss}}} |
|---|---|
| Nearest PromoterID: | {{{nearest_promoter_id}}} |
| Entrez ID: | {{{entrez_id}}} |
| Nearest Unigene: | {{{nearest_unigene}}} |
| Nearest Refseq: | {{{nearest_refseq}}} |
| Nearest Ensembl: | {{{nearest_ensembl}}} |
| Gene Name: | {{{gene_name}}} |
| Gene Alias: | {{{gene_alias}}} |
| Gene Description: | {{{gene_description}}} |
| Gene Type: | {{{gene_type}}} |
| CpG%: | {{{cpg_percent}}} |
| GC%: | {{{gc_percent}}} |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | {{{tata_box}}} |
