Difference between revisions of "TSS:Hg 101743.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.075 |distance_to_tss=-28 |entrez_id=54534 |gc_percent=0.597015 |gene_alias=MRP-L50 |gene_description=mitochondrial ribosomal protein L50 |gene_name=...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=NM_019051:28 ENST00000374865.4:51 uc004bbe.3:51 AK025643:51 AK000500:51 AK295521:61 BC032008:66 JF432491:73 KJ898997:73 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| + | |distance=28 | ||
|distance_to_tss=-28 | |distance_to_tss=-28 | ||
| + | |end=101398665 | ||
|entrez_id=54534 | |entrez_id=54534 | ||
|gc_percent=0.597015 | |gc_percent=0.597015 | ||
|gene_alias=MRP-L50 | |gene_alias=MRP-L50 | ||
|gene_description=mitochondrial ribosomal protein L50 | |gene_description=mitochondrial ribosomal protein L50 | ||
| − | |gene_name=MRPL50 | + | |gene_id=54534 |
| + | |gene_name=mitochondrial ribosomal protein L50 | ||
| + | |gene_source=HGNC:16654 | ||
| + | |gene_symbol=MRPL50 | ||
| + | |gene_synonyms=FLJ20493 MRP-L50 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:16654 | ||
|nearest_ensembl=ENSG00000136897 | |nearest_ensembl=ENSG00000136897 | ||
|nearest_promoter_id=NM_019051 | |nearest_promoter_id=NM_019051 | ||
|nearest_refseq=NM_019051 | |nearest_refseq=NM_019051 | ||
|nearest_unigene=Hs.288224 | |nearest_unigene=Hs.288224 | ||
| + | |num_trans=9 | ||
| + | |species=human | ||
| + | |start=101398664 | ||
| + | |strand=- | ||
| + | |transcript_name=NM_019051 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101743.1 | |tss_id=hg_101743.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q8N5N7 | ||
}} | }} | ||
Revision as of 18:56, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_019051 |
|---|---|
| Distance: | 28 |
| Num_trans: | 9 |
| All_trans: | NM_019051:28 ENST00000374865.4:51 uc004bbe.3:51 AK025643:51 AK000500:51 AK295521:61 BC032008:66 JF432491:73 KJ898997:73 |
TATA-Box annotation
| Distance to TSS: | -28 |
|---|---|
| Nearest PromoterID: | NM_019051 |
| Entrez ID: | 54534 |
| Nearest Unigene: | Hs.288224 |
| Nearest Refseq: | NM_019051 |
| Nearest Ensembl: | ENSG00000136897 |
| Gene Name: | mitochondrial ribosomal protein L50 |
| Gene Alias: | MRP-L50 |
| Gene Description: | mitochondrial ribosomal protein L50 |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
