Difference between revisions of "TSS:Hg 72653.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=LC027945:78 LC027946:78 LC050979:78 LC050980:78 LC050981:78 LC050982:78 LC050983:78 LC050984:78 LC050985:78 LC050986:78 LC050987:78 LC050988:78 LC050989...") |
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| Line 6: | Line 6: | ||
|distance_to_tss=-8502 | |distance_to_tss=-8502 | ||
|end=31186408 | |end=31186408 | ||
| + | |end_of_center_position=31186402 | ||
|entrez_id=100130889 | |entrez_id=100130889 | ||
|gc_percent=0.467662 | |gc_percent=0.467662 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=31186394 | |start=31186394 | ||
| + | |start_of_center_position=31186401 | ||
|strand=- | |strand=- | ||
|tata_box="-29(GACCTTAAAAGG,-,0.00),-27(CCTTAAAAGGGA,+,0.00)" | |tata_box="-29(GACCTTAAAAGG,-,0.00),-27(CCTTAAAAGGGA,+,0.00)" | ||
Revision as of 17:36, 14 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 31186401 |
|---|---|
| End of the center position in the TSS region: | 31186402 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | LC027945 LC027946 LC050979 LC050980 LC050981 LC050982 LC050983 LC050984 LC050985 LC050986 LC050987 LC050988 LC050989 LC050990 LC050991 |
|---|---|
| Distance: | 78 |
| Num_trans: | 15 |
| All_trans: | LC027945:78 LC027946:78 LC050979:78 LC050980:78 LC050981:78 LC050982:78 LC050983:78 LC050984:78 LC050985:78 LC050986:78 LC050987:78 LC050988:78 LC050989:78 LC050990:78 LC050991:78 |
TATA-Box annotation
| Distance to TSS: | -8502 |
|---|---|
| Nearest PromoterID: | NR_026816 |
| Entrez ID: | 100130889 |
| Nearest Unigene: | Hs.670091 |
| Nearest Refseq: | NM_001134284 |
| Nearest Ensembl: | ENSG00000204528 |
| Gene Name: | psoriasis susceptibility 1 candidate 3 (non-protein coding) |
| Gene Alias: | NCRNA00196 |
| Gene Description: | psoriasis susceptibility 1 candidate 3 (non-protein coding) |
| Gene Type: | ncRNA |
| CpG%: | 0.035 |
| GC%: | 0.467662 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-29(GACCTTAAAAGG,-,0.00),-27(CCTTAAAAGGGA,+,0.00)" |
