Difference between revisions of "TSS:Hg 101767.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=-186 |entrez_id=5535 |gc_percent=0.58209 |gene_alias=PPP3RL |gene_description="protein phosphatase 3 regulatory subunit B, beta...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=AK310471:160 ENST00000374806.1:180 NM_147180:180 uc004bbr.3:180 BC030595:180 AF400667:212 AK057524:221 AK302547:221 BC066299:242 JF432717:251 KJ891875:251 AF085237:260 AF145026:260 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| + | |distance=160 | ||
|distance_to_tss=-186 | |distance_to_tss=-186 | ||
| + | |end=101595193 | ||
|entrez_id=5535 | |entrez_id=5535 | ||
|gc_percent=0.58209 | |gc_percent=0.58209 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_147180 | |nearest_refseq=NM_147180 | ||
|nearest_unigene=Hs.151167 | |nearest_unigene=Hs.151167 | ||
| + | |num_trans=13 | ||
| + | |species=human | ||
| + | |start=101595180 | ||
| + | |strand=- | ||
| + | |transcript_name=AK310471 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101767.1 | |tss_id=hg_101767.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 18:57, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK310471 |
|---|---|
| Distance: | 160 |
| Num_trans: | 13 |
| All_trans: | AK310471:160 ENST00000374806.1:180 NM_147180:180 uc004bbr.3:180 BC030595:180 AF400667:212 AK057524:221 AK302547:221 BC066299:242 JF432717:251 KJ891875:251 AF085237:260 AF145026:260 |
TATA-Box annotation
| Distance to TSS: | -186 |
|---|---|
| Nearest PromoterID: | NM_147180 |
| Entrez ID: | 5535 |
| Nearest Unigene: | Hs.151167 |
| Nearest Refseq: | NM_147180 |
| Nearest Ensembl: | ENSG00000188386 |
| Gene Name: | PPP3R2 |
| Gene Alias: | PPP3RL |
| Gene Description: | "protein phosphatase 3 regulatory subunit B, beta" |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.58209 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
