Personal tools

Difference between revisions of "TSS:Hg 75267.1"

From referenceTSS

Jump to: navigation, search
(Created page with "{{TSSDetail |all_trans=ENST00000356128.4:0 uc003pwx.4:0 AK002042:0 |chr=chr6 |cpg_percent=0.01 |distance=0 |distance_to_tss=698 |end=116512348 |entrez_id=254228 |gc_percent=0....")
 
Line 3: Line 3:
 
|chr=chr6
 
|chr=chr6
 
|cpg_percent=0.01
 
|cpg_percent=0.01
 +
|dJ493F7.3=
 
|distance=0
 
|distance=0
 
|distance_to_tss=698
 
|distance_to_tss=698
 
|end=116512348
 
|end=116512348
 +
|end_of_center_position=116512343
 
|entrez_id=254228
 
|entrez_id=254228
 
|gc_percent=0.41791
 
|gc_percent=0.41791
|gene_alias=C6orf188|dJ493F7.3
+
|gene_alias=C6orf188
 
|gene_description=family with sequence similarity 26 member E
 
|gene_description=family with sequence similarity 26 member E
 
|gene_id=100128327
 
|gene_id=100128327
Line 24: Line 26:
 
|species=human
 
|species=human
 
|start=116512337
 
|start=116512337
 +
|start_of_center_position=116512342
 
|strand=-
 
|strand=-
 
|transcript_name=ENST00000356128.4 uc003pwx.4 AK002042
 
|transcript_name=ENST00000356128.4 uc003pwx.4 AK002042

Revision as of 22:42, 14 May 2019

Basic information about the TSS


TSS ID:hg_75267.1
Species:human
Chr:chr6
TSS Classification:no
Start:116512337
End:116512348
Strand:-
TSS Score:1
Start of the center position in the TSS region:116512342
End of the center position in the TSS region:116512343



Gene and protein annotation


Transcript_name:ENST00000356128.4 uc003pwx.4 AK002042
Distance:0
GeneID:100128327
HGNC/MGI_ID:HGNC:21090
UniProt_ID:Q5T215
Gene_name:trafficking protein particle complex 3 like
Gene_symbol:TRAPPC3L
Gene_synonyms:FLJ11180 bA259P20.2
Gene_source:HGNC:21090



Transcript annotation


Transcript_name:ENST00000356128.4 uc003pwx.4 AK002042
Distance:0
Num_trans:3
All_trans:ENST00000356128.4:0 uc003pwx.4:0 AK002042:0



TATA-Box annotation


Distance to TSS:698
Nearest PromoterID:NM_153711
Entrez ID:254228
Nearest Unigene:Hs.105081
Nearest Refseq:NM_153711
Nearest Ensembl:ENSG00000178033
Gene Name:trafficking protein particle complex 3 like
Gene Alias:C6orf188
Gene Description:family with sequence similarity 26 member E
Gene Type:protein-coding
CpG%:0.01
GC%:0.41791
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):