Difference between revisions of "TSS:Hg 78447.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |CYPH= | ||
| + | |HEL-S-69p= | ||
|all_trans=AB451438:-391 AB451307:-391 CR456707:-391 CU674338:-392 KJ891858:-392 KJ905864:-392 KJ897362:-392 DQ895865:-393 DQ892625:-393 AB464007:-394 Y00052:-405 BC000689:-413 BC003026:-419 BC069050:-421 BC073992:-425 BC106030:-427 EU794650:-427 ENST00000415933.5:-434 uc064djs.1:-434 D28351:-434 BC005320:-434 BC018843:-434 AK290085:-434 ENST00000489459.5:-435 ENST00000355968.10:-435 ENST00000620047.4:-435 ENST00000479021.1:-435 uc064djo.1:-435 uc064djp.1:-435 uc064djq.1:-435 uc064djr.1:-435 AK316564:-435 AK026569:-435 BC093076:-435 AK297340:-435 ENST00000481437.5:-436 ENST00000451562.5:-436 ENST00000468812.5:-436 uc064djm.1:-436 uc064djn.1:-436 uc003tlw.4:-436 BC007104:-436 BC013915:-436 AK293003:-436 AK130101:-436 BC005982:-437 AK290851:-437 NM_001300981:-480 NM_021130:-480 BC137057:-480 BC137058:-480 | |all_trans=AB451438:-391 AB451307:-391 CR456707:-391 CU674338:-392 KJ891858:-392 KJ905864:-392 KJ897362:-392 DQ895865:-393 DQ892625:-393 AB464007:-394 Y00052:-405 BC000689:-413 BC003026:-419 BC069050:-421 BC073992:-425 BC106030:-427 EU794650:-427 ENST00000415933.5:-434 uc064djs.1:-434 D28351:-434 BC005320:-434 BC018843:-434 AK290085:-434 ENST00000489459.5:-435 ENST00000355968.10:-435 ENST00000620047.4:-435 ENST00000479021.1:-435 uc064djo.1:-435 uc064djp.1:-435 uc064djq.1:-435 uc064djr.1:-435 AK316564:-435 AK026569:-435 BC093076:-435 AK297340:-435 ENST00000481437.5:-436 ENST00000451562.5:-436 ENST00000468812.5:-436 uc064djm.1:-436 uc064djn.1:-436 uc003tlw.4:-436 BC007104:-436 BC013915:-436 AK293003:-436 AK130101:-436 BC005982:-437 AK290851:-437 NM_001300981:-480 NM_021130:-480 BC137057:-480 BC137058:-480 | ||
|chr=chr7 | |chr=chr7 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=488 | |distance_to_tss=488 | ||
|end=44797132 | |end=44797132 | ||
| + | |end_of_center_position=44797124 | ||
|entrez_id=5478 | |entrez_id=5478 | ||
|gc_percent=0.756219 | |gc_percent=0.756219 | ||
| − | |gene_alias=CYPA | + | |gene_alias=CYPA |
|gene_description=peptidylprolyl isomerase A | |gene_description=peptidylprolyl isomerase A | ||
|gene_id=5478 | |gene_id=5478 | ||
| Line 24: | Line 27: | ||
|species=human | |species=human | ||
|start=44797115 | |start=44797115 | ||
| + | |start_of_center_position=44797123 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AB451438 AB451307 CR456707 | |transcript_name=AB451438 AB451307 CR456707 | ||
Revision as of 05:10, 15 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 44797123 |
|---|---|
| End of the center position in the TSS region: | 44797124 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AB451438 AB451307 CR456707 |
|---|---|
| Distance: | -391 |
| Num_trans: | 51 |
| All_trans: | AB451438:-391 AB451307:-391 CR456707:-391 CU674338:-392 KJ891858:-392 KJ905864:-392 KJ897362:-392 DQ895865:-393 DQ892625:-393 AB464007:-394 Y00052:-405 BC000689:-413 BC003026:-419 BC069050:-421 BC073992:-425 BC106030:-427 EU794650:-427 ENST00000415933.5:-434 uc064djs.1:-434 D28351:-434 BC005320:-434 BC018843:-434 AK290085:-434 ENST00000489459.5:-435 ENST00000355968.10:-435 ENST00000620047.4:-435 ENST00000479021.1:-435 uc064djo.1:-435 uc064djp.1:-435 uc064djq.1:-435 uc064djr.1:-435 AK316564:-435 AK026569:-435 BC093076:-435 AK297340:-435 ENST00000481437.5:-436 ENST00000451562.5:-436 ENST00000468812.5:-436 uc064djm.1:-436 uc064djn.1:-436 uc003tlw.4:-436 BC007104:-436 BC013915:-436 AK293003:-436 AK130101:-436 BC005982:-437 AK290851:-437 NM_001300981:-480 NM_021130:-480 BC137057:-480 BC137058:-480 |
TATA-Box annotation
| Distance to TSS: | 488 |
|---|---|
| Nearest PromoterID: | NM_001300981 |
| Entrez ID: | 5478 |
| Nearest Unigene: | Hs.356331 |
| Nearest Refseq: | NM_021130 |
| Nearest Ensembl: | ENSG00000196262 |
| Gene Name: | peptidylprolyl isomerase A |
| Gene Alias: | CYPA |
| Gene Description: | peptidylprolyl isomerase A |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.756219 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
