Difference between revisions of "TSS:Hg 78886.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=BC015330:0 ENST00000442563.5:22 ENST00000450873.6:22 ENST00000284957.9:22 uc064eao.1:22 uc010lag.4:22 uc003tvh.4:22 AK223329:22 AK290678:22 AJ250042:22...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |RAP1= | ||
|all_trans=BC015330:0 ENST00000442563.5:22 ENST00000450873.6:22 ENST00000284957.9:22 uc064eao.1:22 uc010lag.4:22 uc003tvh.4:22 AK223329:22 AK290678:22 AJ250042:22 ENST00000510829.6:-29 NM_014504:-29 NM_001287062:-29 uc064ean.1:-29 | |all_trans=BC015330:0 ENST00000442563.5:22 ENST00000450873.6:22 ENST00000284957.9:22 uc064eao.1:22 uc010lag.4:22 uc003tvh.4:22 AK223329:22 AK290678:22 AJ250042:22 ENST00000510829.6:-29 NM_014504:-29 NM_001287062:-29 uc064ean.1:-29 | ||
|chr=chr7 | |chr=chr7 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=42 | |distance_to_tss=42 | ||
|end=66740711 | |end=66740711 | ||
| + | |end_of_center_position=66740698 | ||
|entrez_id=27342 | |entrez_id=27342 | ||
|gc_percent=0.731343 | |gc_percent=0.731343 | ||
| − | |gene_alias=RABEX5 | + | |gene_alias=RABEX5 |
|gene_description=RAB guanine nucleotide exchange factor 1 | |gene_description=RAB guanine nucleotide exchange factor 1 | ||
|gene_id=27342 | |gene_id=27342 | ||
| Line 22: | Line 24: | ||
|nearest_unigene=Hs.530053 | |nearest_unigene=Hs.530053 | ||
|num_trans=14 | |num_trans=14 | ||
| + | |rabex-5= | ||
|species=human | |species=human | ||
|start=66740684 | |start=66740684 | ||
| + | |start_of_center_position=66740697 | ||
|strand=+ | |strand=+ | ||
|transcript_name=BC015330 | |transcript_name=BC015330 | ||
Revision as of 05:55, 15 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 66740697 |
|---|---|
| End of the center position in the TSS region: | 66740698 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC015330 |
|---|---|
| Distance: | 0 |
| Num_trans: | 14 |
| All_trans: | BC015330:0 ENST00000442563.5:22 ENST00000450873.6:22 ENST00000284957.9:22 uc064eao.1:22 uc010lag.4:22 uc003tvh.4:22 AK223329:22 AK290678:22 AJ250042:22 ENST00000510829.6:-29 NM_014504:-29 NM_001287062:-29 uc064ean.1:-29 |
TATA-Box annotation
| Distance to TSS: | 42 |
|---|---|
| Nearest PromoterID: | NM_001287062 |
| Entrez ID: | 27342 |
| Nearest Unigene: | Hs.530053 |
| Nearest Refseq: | NM_014504 |
| Nearest Ensembl: | ENSG00000154710 |
| Gene Name: | RAB guanine nucleotide exchange factor 1 |
| Gene Alias: | RABEX5 |
| Gene Description: | RAB guanine nucleotide exchange factor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.731343 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
