Difference between revisions of "TSS:Hg 79083.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000491595.1:0 uc064eit.1:0 BC001609:9 ENST00000475494.5:18 uc064eiu.1:18 AK002099:31 ENST00000398475.5:45 uc064eiv.1:45 BC006080:45 ENST0000036108...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |LAB= | ||
| + | |NTAL= | ||
| + | |WBSCR15= | ||
| + | |WBSCR5= | ||
| + | |WSCR5= | ||
|all_trans=ENST00000491595.1:0 uc064eit.1:0 BC001609:9 ENST00000475494.5:18 uc064eiu.1:18 AK002099:31 ENST00000398475.5:45 uc064eiv.1:45 BC006080:45 ENST00000361082.7:70 ENST00000488266.5:70 ENST00000275635.11:70 uc064eiw.1:70 uc003uah.4:70 uc064eix.1:70 AF161531:70 AF252611:70 AF252612:70 AF252614:70 AK225150:70 AK290916:73 AK290074:73 AF252613:85 ENST00000470709.1:87 uc064eiy.1:87 NM_014146:-165 NM_032463:-165 NM_032464:-165 | |all_trans=ENST00000491595.1:0 uc064eit.1:0 BC001609:9 ENST00000475494.5:18 uc064eiu.1:18 AK002099:31 ENST00000398475.5:45 uc064eiv.1:45 BC006080:45 ENST00000361082.7:70 ENST00000488266.5:70 ENST00000275635.11:70 uc064eiw.1:70 uc003uah.4:70 uc064eix.1:70 AF161531:70 AF252611:70 AF252612:70 AF252614:70 AK225150:70 AK290916:73 AK290074:73 AF252613:85 ENST00000470709.1:87 uc064eiy.1:87 NM_014146:-165 NM_032463:-165 NM_032464:-165 | ||
|chr=chr7 | |chr=chr7 | ||
| Line 6: | Line 11: | ||
|distance_to_tss=172 | |distance_to_tss=172 | ||
|end=74209936 | |end=74209936 | ||
| + | |end_of_center_position=74209929 | ||
|entrez_id=7462 | |entrez_id=7462 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
| − | |gene_alias=HSPC046 | + | |gene_alias=HSPC046 |
|gene_description=linker for activation of T-cells family member 2 | |gene_description=linker for activation of T-cells family member 2 | ||
|gene_id=7462 | |gene_id=7462 | ||
| Line 24: | Line 30: | ||
|species=human | |species=human | ||
|start=74209921 | |start=74209921 | ||
| + | |start_of_center_position=74209928 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000491595.1 uc064eit.1 | |transcript_name=ENST00000491595.1 uc064eit.1 | ||
Revision as of 06:14, 15 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 74209928 |
|---|---|
| End of the center position in the TSS region: | 74209929 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000491595.1 uc064eit.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 28 |
| All_trans: | ENST00000491595.1:0 uc064eit.1:0 BC001609:9 ENST00000475494.5:18 uc064eiu.1:18 AK002099:31 ENST00000398475.5:45 uc064eiv.1:45 BC006080:45 ENST00000361082.7:70 ENST00000488266.5:70 ENST00000275635.11:70 uc064eiw.1:70 uc003uah.4:70 uc064eix.1:70 AF161531:70 AF252611:70 AF252612:70 AF252614:70 AK225150:70 AK290916:73 AK290074:73 AF252613:85 ENST00000470709.1:87 uc064eiy.1:87 NM_014146:-165 NM_032463:-165 NM_032464:-165 |
TATA-Box annotation
| Distance to TSS: | 172 |
|---|---|
| Nearest PromoterID: | NM_032463 |
| Entrez ID: | 7462 |
| Nearest Unigene: | Hs.741249 |
| Nearest Refseq: | NM_014146 |
| Nearest Ensembl: | ENSG00000086730 |
| Gene Name: | linker for activation of T-cells family member 2 |
| Gene Alias: | HSPC046 |
| Gene Description: | linker for activation of T-cells family member 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
