Difference between revisions of "TSS:Hg 101816.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.155 |distance_to_tss=-63548 |entrez_id=19 |gc_percent=0.706468 |gene_alias=ABC-1|ABC1|CERP|HDLDT1|TGD |gene_description=ATP binding cassette subfami...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ABC1= | ||
| + | |CERP= | ||
| + | |HDLDT1= | ||
| + | |TGD= | ||
| + | |all_trans=ENST00000457720.1:7 uc064uwr.1:7 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
| + | |distance=7 | ||
|distance_to_tss=-63548 | |distance_to_tss=-63548 | ||
| + | |end=104991800 | ||
|entrez_id=19 | |entrez_id=19 | ||
|gc_percent=0.706468 | |gc_percent=0.706468 | ||
| Line 12: | Line 20: | ||
|nearest_refseq=NM_005502 | |nearest_refseq=NM_005502 | ||
|nearest_unigene=Hs.659274 | |nearest_unigene=Hs.659274 | ||
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=104991787 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000457720.1 uc064uwr.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101816.1 | |tss_id=hg_101816.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 18:59, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000457720.1 uc064uwr.1 |
|---|---|
| Distance: | 7 |
| Num_trans: | 2 |
| All_trans: | ENST00000457720.1:7 uc064uwr.1:7 |
TATA-Box annotation
| Distance to TSS: | -63548 |
|---|---|
| Nearest PromoterID: | NM_005502 |
| Entrez ID: | 19 |
| Nearest Unigene: | Hs.659274 |
| Nearest Refseq: | NM_005502 |
| Nearest Ensembl: | ENSG00000165029 |
| Gene Name: | ABCA1 |
| Gene Alias: | ABC-1 |
| Gene Description: | ATP binding cassette subfamily A member 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.706468 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
