Difference between revisions of "TSS:Hg 101845.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.135 |distance_to_tss=139 |entrez_id=9314 |gc_percent=0.791045 |gene_alias=EZF|GKLF |gene_description=Kruppel like factor 4 |gene_name=KLF4 |gene_typ...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |GKLF= | ||
| + | |all_trans=AF022184:0 ENST00000374672.4:-40 uc004bdg.4:-40 U70663:-40 AF105036:82 NM_004235:-114 NM_001314052:-114 ENST00000493306.1:119 uc064uyp.1:119 HF546201:155 HF546202:155 HF546213:155 ENST00000610832.1:-160 uc064uyq.1:-160 AK313489:247 BC029923:271 BC030811:382 ENST00000411706.1:426 uc064uyr.1:426 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
| + | |distance=0 | ||
|distance_to_tss=139 | |distance_to_tss=139 | ||
| + | |end=107489606 | ||
|entrez_id=9314 | |entrez_id=9314 | ||
|gc_percent=0.791045 | |gc_percent=0.791045 | ||
|gene_alias=EZF|GKLF | |gene_alias=EZF|GKLF | ||
|gene_description=Kruppel like factor 4 | |gene_description=Kruppel like factor 4 | ||
| − | |gene_name=KLF4 | + | |gene_id=9314 |
| + | |gene_name=Kruppel-like factor 4 (gut) | ||
| + | |gene_source=HGNC:6348 | ||
| + | |gene_symbol=KLF4 | ||
| + | |gene_synonyms=EZF GKLF | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:6348 | ||
|nearest_ensembl=ENSG00000136826 | |nearest_ensembl=ENSG00000136826 | ||
|nearest_promoter_id=NM_001314052 | |nearest_promoter_id=NM_001314052 | ||
|nearest_refseq=NM_004235 | |nearest_refseq=NM_004235 | ||
|nearest_unigene=Hs.376206 | |nearest_unigene=Hs.376206 | ||
| + | |num_trans=19 | ||
| + | |species=human | ||
| + | |start=107489555 | ||
| + | |strand=- | ||
| + | |transcript_name=AF022184 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101845.1 | |tss_id=hg_101845.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 19:01, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AF022184 |
|---|---|
| Distance: | 0 |
| Num_trans: | 19 |
| All_trans: | AF022184:0 ENST00000374672.4:-40 uc004bdg.4:-40 U70663:-40 AF105036:82 NM_004235:-114 NM_001314052:-114 ENST00000493306.1:119 uc064uyp.1:119 HF546201:155 HF546202:155 HF546213:155 ENST00000610832.1:-160 uc064uyq.1:-160 AK313489:247 BC029923:271 BC030811:382 ENST00000411706.1:426 uc064uyr.1:426 |
TATA-Box annotation
| Distance to TSS: | 139 |
|---|---|
| Nearest PromoterID: | NM_001314052 |
| Entrez ID: | 9314 |
| Nearest Unigene: | Hs.376206 |
| Nearest Refseq: | NM_004235 |
| Nearest Ensembl: | ENSG00000136826 |
| Gene Name: | Kruppel-like factor 4 (gut) |
| Gene Alias: | EZF |
| Gene Description: | Kruppel like factor 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.791045 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
