Difference between revisions of "TSS:Hg 82388.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000488527.5:147 uc064avh.1:147 |chr=chr7 |cpg_percent=0.045 |distance=147 |distance_to_tss=-2597 |end=923488 |entrez_id=11033 |gc_percent=0.59204...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |GCS1L= | ||
|all_trans=ENST00000488527.5:147 uc064avh.1:147 | |all_trans=ENST00000488527.5:147 uc064avh.1:147 | ||
|chr=chr7 | |chr=chr7 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=-2597 | |distance_to_tss=-2597 | ||
|end=923488 | |end=923488 | ||
| + | |end_of_center_position=923487 | ||
|entrez_id=11033 | |entrez_id=11033 | ||
|gc_percent=0.59204 | |gc_percent=0.59204 | ||
| − | |gene_alias=CENTA1 | + | |gene_alias=CENTA1 |
|gene_description=ArfGAP with dual PH domains 1 | |gene_description=ArfGAP with dual PH domains 1 | ||
|gene_id=11033 | |gene_id=11033 | ||
| Line 22: | Line 24: | ||
|nearest_unigene=Hs.602573 | |nearest_unigene=Hs.602573 | ||
|num_trans=2 | |num_trans=2 | ||
| + | |p42IP4= | ||
|species=human | |species=human | ||
|start=923484 | |start=923484 | ||
| + | |start_of_center_position=923486 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000488527.5 uc064avh.1 | |transcript_name=ENST00000488527.5 uc064avh.1 | ||
Revision as of 02:11, 15 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 923486 |
|---|---|
| End of the center position in the TSS region: | 923487 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000488527.5 uc064avh.1 |
|---|---|
| Distance: | 147 |
| Num_trans: | 2 |
| All_trans: | ENST00000488527.5:147 uc064avh.1:147 |
TATA-Box annotation
| Distance to TSS: | -2597 |
|---|---|
| Nearest PromoterID: | NM_001284311 |
| Entrez ID: | 11033 |
| Nearest Unigene: | Hs.602573 |
| Nearest Refseq: | NM_006869 |
| Nearest Ensembl: | ENSG00000105963 |
| Gene Name: | ArfGAP with dual PH domains 1 |
| Gene Alias: | CENTA1 |
| Gene Description: | ArfGAP with dual PH domains 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
