Difference between revisions of "TSS:Hg 101868.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.105 |distance_to_tss=278 |entrez_id=8518 |gc_percent=0.661692 |gene_alias=DYS|ELP1|FD|IKAP|IKI3|TOT1 |gene_description="inhibitor of kappa light pol...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ELP1= | ||
| + | |FD= | ||
| + | |IKAP= | ||
| + | |IKI3= | ||
| + | |TOT1= | ||
| + | |all_trans=AK225798:-28 AB210033:-35 AF044195:-51 ENST00000374647.9:-57 uc004bdm.5:-57 AK001641:-57 AF153419:-59 AK289962:-65 AK304742:75 ENST00000537196.1:96 uc010mtq.4:96 CR749385:96 BC033094:155 NM_003640:-273 NM_001318360:-273 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| + | |distance=-28 | ||
|distance_to_tss=278 | |distance_to_tss=278 | ||
| + | |end=108934059 | ||
|entrez_id=8518 | |entrez_id=8518 | ||
|gc_percent=0.661692 | |gc_percent=0.661692 | ||
|gene_alias=DYS|ELP1|FD|IKAP|IKI3|TOT1 | |gene_alias=DYS|ELP1|FD|IKAP|IKI3|TOT1 | ||
|gene_description="inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein" | |gene_description="inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein" | ||
| − | |gene_name=IKBKAP | + | |gene_id=8518 |
| + | |gene_name="inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein" | ||
| + | |gene_source=HGNC:5959 | ||
| + | |gene_symbol=IKBKAP | ||
| + | |gene_synonyms=ELP1 IKAP IKI3 TOT1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:5959 | ||
|nearest_ensembl=ENSG00000070061 | |nearest_ensembl=ENSG00000070061 | ||
|nearest_promoter_id=NM_003640 | |nearest_promoter_id=NM_003640 | ||
|nearest_refseq=NM_003640 | |nearest_refseq=NM_003640 | ||
|nearest_unigene=Hs.494738 | |nearest_unigene=Hs.494738 | ||
| + | |num_trans=15 | ||
| + | |species=human | ||
| + | |start=108934048 | ||
| + | |strand=- | ||
| + | |transcript_name=AK225798 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101868.1 | |tss_id=hg_101868.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 19:02, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK225798 |
|---|---|
| Distance: | -28 |
| Num_trans: | 15 |
| All_trans: | AK225798:-28 AB210033:-35 AF044195:-51 ENST00000374647.9:-57 uc004bdm.5:-57 AK001641:-57 AF153419:-59 AK289962:-65 AK304742:75 ENST00000537196.1:96 uc010mtq.4:96 CR749385:96 BC033094:155 NM_003640:-273 NM_001318360:-273 |
TATA-Box annotation
| Distance to TSS: | 278 |
|---|---|
| Nearest PromoterID: | NM_003640 |
| Entrez ID: | 8518 |
| Nearest Unigene: | Hs.494738 |
| Nearest Refseq: | NM_003640 |
| Nearest Ensembl: | ENSG00000070061 |
| Gene Name: | "inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein" |
| Gene Alias: | DYS |
| Gene Description: | "inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein" |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
