Difference between revisions of "TSS:Hg 101910.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=-8024 |entrez_id=114299 |gc_percent=0.567164 |gene_alias=AKAP2 |gene_description=paralemmin 2 |gene_name=PALM2 |gene_type=protei...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000449258.1:227 uc064uzr.1:227 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| + | |distance=227 | ||
|distance_to_tss=-8024 | |distance_to_tss=-8024 | ||
| + | |end=109772276 | ||
|entrez_id=114299 | |entrez_id=114299 | ||
|gc_percent=0.567164 | |gc_percent=0.567164 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_053016 | |nearest_refseq=NM_053016 | ||
|nearest_unigene=Hs.591908 | |nearest_unigene=Hs.591908 | ||
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=109772269 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000449258.1 uc064uzr.1 | ||
| + | |tss_classification=no | ||
|tss_id=hg_101910.1 | |tss_id=hg_101910.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 19:03, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000449258.1 uc064uzr.1 |
|---|---|
| Distance: | 227 |
| Num_trans: | 2 |
| All_trans: | ENST00000449258.1:227 uc064uzr.1:227 |
TATA-Box annotation
| Distance to TSS: | -8024 |
|---|---|
| Nearest PromoterID: | NM_053016 |
| Entrez ID: | 114299 |
| Nearest Unigene: | Hs.591908 |
| Nearest Refseq: | NM_053016 |
| Nearest Ensembl: | ENSG00000157654 |
| Gene Name: | PALM2 |
| Gene Alias: | AKAP2 |
| Gene Description: | paralemmin 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.567164 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
