Difference between revisions of "TSS:Hg 88786.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000523432.5:0 ENST00000521346.5:0 ENST00000518360.5:0 NM_003350:0 uc064mrb.1:0 uc064mrc.1:0 uc064mrd.1:0 BC016332:0 BC016710:0 BC007051:0 AK313447...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |DDVit-1= | ||
| + | |EDAF-1= | ||
| + | |EDPF-1= | ||
| + | |EDPF1= | ||
| + | |MMS2= | ||
| + | |UEV-2= | ||
| + | |UEV2= | ||
|all_trans=ENST00000523432.5:0 ENST00000521346.5:0 ENST00000518360.5:0 NM_003350:0 uc064mrb.1:0 uc064mrc.1:0 uc064mrd.1:0 BC016332:0 BC016710:0 BC007051:0 AK313447:0 U62136:0 BC062418:0 BC028673:0 AF049140:0 X98091:0 ENST00000517630.5:4 uc064mre.1:4 ENST00000523111.6:-10 uc003xqm.4:-10 | |all_trans=ENST00000523432.5:0 ENST00000521346.5:0 ENST00000518360.5:0 NM_003350:0 uc064mrb.1:0 uc064mrc.1:0 uc064mrd.1:0 BC016332:0 BC016710:0 BC007051:0 AK313447:0 U62136:0 BC062418:0 BC028673:0 AF049140:0 X98091:0 ENST00000517630.5:4 uc064mre.1:4 ENST00000523111.6:-10 uc003xqm.4:-10 | ||
|chr=chr8 | |chr=chr8 | ||
| Line 6: | Line 13: | ||
|distance_to_tss=-7 | |distance_to_tss=-7 | ||
|end=48008447 | |end=48008447 | ||
| + | |end_of_center_position=48008429 | ||
|entrez_id=7336 | |entrez_id=7336 | ||
|gc_percent=0.756219 | |gc_percent=0.756219 | ||
| − | |gene_alias=DDVIT1 | + | |gene_alias=DDVIT1 |
|gene_description=ubiquitin conjugating enzyme E2 V2 | |gene_description=ubiquitin conjugating enzyme E2 V2 | ||
|gene_id=7336 | |gene_id=7336 | ||
| Line 24: | Line 32: | ||
|species=human | |species=human | ||
|start=48008409 | |start=48008409 | ||
| + | |start_of_center_position=48008428 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000523432.5 ENST00000521346.5 ENST00000518360.5 NM_003350 uc064mrb.1 uc064mrc.1 uc064mrd.1 BC016332 BC016710 BC007051 AK313447 U62136 BC062418 BC028673 AF049140 X98091 | |transcript_name=ENST00000523432.5 ENST00000521346.5 ENST00000518360.5 NM_003350 uc064mrb.1 uc064mrc.1 uc064mrd.1 BC016332 BC016710 BC007051 AK313447 U62136 BC062418 BC028673 AF049140 X98091 | ||
Revision as of 18:42, 10 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 48008428 |
|---|---|
| End of the center position in the TSS region: | 48008429 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000523432.5 ENST00000521346.5 ENST00000518360.5 NM_003350 uc064mrb.1 uc064mrc.1 uc064mrd.1 BC016332 BC016710 BC007051 AK313447 U62136 BC062418 BC028673 AF049140 X98091 |
|---|---|
| Distance: | 0 |
| Num_trans: | 20 |
| All_trans: | ENST00000523432.5:0 ENST00000521346.5:0 ENST00000518360.5:0 NM_003350:0 uc064mrb.1:0 uc064mrc.1:0 uc064mrd.1:0 BC016332:0 BC016710:0 BC007051:0 AK313447:0 U62136:0 BC062418:0 BC028673:0 AF049140:0 X98091:0 ENST00000517630.5:4 uc064mre.1:4 ENST00000523111.6:-10 uc003xqm.4:-10 |
TATA-Box annotation
| Distance to TSS: | -7 |
|---|---|
| Nearest PromoterID: | NM_003350 |
| Entrez ID: | 7336 |
| Nearest Unigene: | Hs.491695 |
| Nearest Refseq: | NM_003350 |
| Nearest Ensembl: | ENSG00000169139 |
| Gene Name: | ubiquitin conjugating enzyme E2 V2 |
| Gene Alias: | DDVIT1 |
| Gene Description: | ubiquitin conjugating enzyme E2 V2 |
| Gene Type: | protein-coding |
| CpG%: | 0.17 |
| GC%: | 0.756219 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
