Difference between revisions of "TSS:Hg 101927.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=22 |entrez_id=255220 |gc_percent=0.39801 |gene_alias=SPTRX-3|TRX6|bA427L11.2 |gene_description=thioredoxin domain containing 8...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |TRX6= | ||
| + | |all_trans=ENST00000374507.4:11 uc033dfg.2:11 BC035743:13 ENST00000374511.7:-17 NM_001286946:-17 NM_001003936:-17 NM_001286947:-17 uc064vad.1:-17 ENST00000374510.8:50 ENST00000423740.6:50 uc004bes.5:50 uc011lwl.4:50 AF305830:50 BC130549:50 BC130551:50 BC144461:50 HQ258720:61 KJ895911:61 | ||
| + | |bA427L11.2= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| + | |distance=11 | ||
|distance_to_tss=22 | |distance_to_tss=22 | ||
| + | |end=110337867 | ||
|entrez_id=255220 | |entrez_id=255220 | ||
|gc_percent=0.39801 | |gc_percent=0.39801 | ||
|gene_alias=SPTRX-3|TRX6|bA427L11.2 | |gene_alias=SPTRX-3|TRX6|bA427L11.2 | ||
|gene_description=thioredoxin domain containing 8 | |gene_description=thioredoxin domain containing 8 | ||
| − | |gene_name=TXNDC8 | + | |gene_id=255220 |
| + | |gene_name=thioredoxin domain containing 8 (spermatozoa) | ||
| + | |gene_source=HGNC:31454 | ||
| + | |gene_symbol=TXNDC8 | ||
| + | |gene_synonyms=SPTRX-3 TRX6 bA427L11.2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:31454 | ||
|nearest_ensembl=ENSG00000204193 | |nearest_ensembl=ENSG00000204193 | ||
|nearest_promoter_id=NM_001286946 | |nearest_promoter_id=NM_001286946 | ||
|nearest_refseq=NM_001003936 | |nearest_refseq=NM_001003936 | ||
|nearest_unigene=Hs.147064 | |nearest_unigene=Hs.147064 | ||
| + | |num_trans=18 | ||
| + | |species=human | ||
| + | |start=110337857 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000374507.4 uc033dfg.2 | ||
| + | |tss_classification=no | ||
|tss_id=hg_101927.1 | |tss_id=hg_101927.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A9Z1W9 | ||
}} | }} | ||
Revision as of 19:04, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000374507.4 uc033dfg.2 |
|---|---|
| Distance: | 11 |
| Num_trans: | 18 |
| All_trans: | ENST00000374507.4:11 uc033dfg.2:11 BC035743:13 ENST00000374511.7:-17 NM_001286946:-17 NM_001003936:-17 NM_001286947:-17 uc064vad.1:-17 ENST00000374510.8:50 ENST00000423740.6:50 uc004bes.5:50 uc011lwl.4:50 AF305830:50 BC130549:50 BC130551:50 BC144461:50 HQ258720:61 KJ895911:61 |
TATA-Box annotation
| Distance to TSS: | 22 |
|---|---|
| Nearest PromoterID: | NM_001286946 |
| Entrez ID: | 255220 |
| Nearest Unigene: | Hs.147064 |
| Nearest Refseq: | NM_001003936 |
| Nearest Ensembl: | ENSG00000204193 |
| Gene Name: | thioredoxin domain containing 8 (spermatozoa) |
| Gene Alias: | SPTRX-3 |
| Gene Description: | thioredoxin domain containing 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.39801 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
