Difference between revisions of "TSS:Hg 121321.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.085 |distance_to_tss=8 |entrez_id=10008 |gc_percent=0.756219 |gene_alias=HOKPP|HYPP|MiRP2 |gene_description=potassium voltage-gated channel subfamil...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |HYPP= | ||
| + | |MiRP2= | ||
| + | |all_trans=ENST00000531854.5:0 ENST00000529425.5:0 ENST00000526855.1:0 NM_005472:0 uc058fju.1:0 uc058fjv.1:0 uc058fjw.1:0 CR936625:0 DQ192291:0 ENST00000310128.8:-72 uc001ovc.4:-72 ENST00000532569.5:-173 uc058fjt.1:-173 | ||
| + | |chr=chr11 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| + | |distance=0 | ||
|distance_to_tss=8 | |distance_to_tss=8 | ||
| + | |end=74467556 | ||
|entrez_id=10008 | |entrez_id=10008 | ||
|gc_percent=0.756219 | |gc_percent=0.756219 | ||
|gene_alias=HOKPP|HYPP|MiRP2 | |gene_alias=HOKPP|HYPP|MiRP2 | ||
|gene_description=potassium voltage-gated channel subfamily E regulatory subunit 3 | |gene_description=potassium voltage-gated channel subfamily E regulatory subunit 3 | ||
| − | |gene_name=KCNE3 | + | |gene_id=10008 |
| + | |gene_name=potassium voltage-gated channel subfamily E regulatory subunit 3 | ||
| + | |gene_source=HGNC:6243 | ||
| + | |gene_symbol=KCNE3 | ||
| + | |gene_synonyms=HOKPP MiRP2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:6243 | ||
|nearest_ensembl=ENSG00000175538 | |nearest_ensembl=ENSG00000175538 | ||
|nearest_promoter_id=NM_005472 | |nearest_promoter_id=NM_005472 | ||
|nearest_refseq=NM_005472 | |nearest_refseq=NM_005472 | ||
|nearest_unigene=Hs.523899 | |nearest_unigene=Hs.523899 | ||
| + | |num_trans=13 | ||
| + | |species=human | ||
| + | |start=74467537 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000531854.5 ENST00000529425.5 ENST00000526855.1 NM_005472 uc058fju.1 uc058fjv.1 uc058fjw.1 CR936625 DQ192291 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_121321.1 | |tss_id=hg_121321.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=E9PJQ7 E9PJV9 E9PN03 Q9Y6H6 | ||
}} | }} | ||
Revision as of 08:54, 9 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000531854.5 ENST00000529425.5 ENST00000526855.1 NM_005472 uc058fju.1 uc058fjv.1 uc058fjw.1 CR936625 DQ192291 |
|---|---|
| Distance: | 0 |
| Num_trans: | 13 |
| All_trans: | ENST00000531854.5:0 ENST00000529425.5:0 ENST00000526855.1:0 NM_005472:0 uc058fju.1:0 uc058fjv.1:0 uc058fjw.1:0 CR936625:0 DQ192291:0 ENST00000310128.8:-72 uc001ovc.4:-72 ENST00000532569.5:-173 uc058fjt.1:-173 |
TATA-Box annotation
| Distance to TSS: | 8 |
|---|---|
| Nearest PromoterID: | NM_005472 |
| Entrez ID: | 10008 |
| Nearest Unigene: | Hs.523899 |
| Nearest Refseq: | NM_005472 |
| Nearest Ensembl: | ENSG00000175538 |
| Gene Name: | potassium voltage-gated channel subfamily E regulatory subunit 3 |
| Gene Alias: | HOKPP |
| Gene Description: | potassium voltage-gated channel subfamily E regulatory subunit 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.756219 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
