Difference between revisions of "TSS:Hg 10196.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=-12 |entrez_id=6518 |gc_percent=0.517413 |gene_alias=GLUT-5|GLUT5 |gene_description=solute carrier family 2 member 5 |gene_name=...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |GLUT5= | ||
| + | |all_trans=ENST00000473209.1:-8 uc057caj.1:-8 NM_003039:9 NM_001135585:9 ENST00000377424.8:121 uc001apo.4:121 AK294368:185 AK290398:219 M55531:226 ENST00000377414.7:233 uc001app.5:233 BC035878:233 AK295785:241 BC001692:250 BC001820:250 AK289849:253 AK300091:292 KJ892149:299 KJ892150:299 CU674838:299 DQ892291:300 DQ895491:300 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| + | |distance=-8 | ||
|distance_to_tss=-12 | |distance_to_tss=-12 | ||
| + | |end=9069843 | ||
|entrez_id=6518 | |entrez_id=6518 | ||
|gc_percent=0.517413 | |gc_percent=0.517413 | ||
|gene_alias=GLUT-5|GLUT5 | |gene_alias=GLUT-5|GLUT5 | ||
|gene_description=solute carrier family 2 member 5 | |gene_description=solute carrier family 2 member 5 | ||
| − | |gene_name=SLC2A5 | + | |gene_id=6518 |
| + | |gene_name=solute carrier family 2 member 5 | ||
| + | |gene_source=HGNC:11010 | ||
| + | |gene_symbol=SLC2A5 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:11010 | ||
|nearest_ensembl=ENSG00000142583 | |nearest_ensembl=ENSG00000142583 | ||
|nearest_promoter_id=NM_003039 | |nearest_promoter_id=NM_003039 | ||
|nearest_refseq=NM_003039 | |nearest_refseq=NM_003039 | ||
|nearest_unigene=Hs.530003 | |nearest_unigene=Hs.530003 | ||
| + | |num_trans=22 | ||
| + | |species=human | ||
| + | |start=9069836 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000473209.1 uc057caj.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10196.1 | |tss_id=hg_10196.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=K7EJR1 | ||
}} | }} | ||
Revision as of 19:06, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000473209.1 uc057caj.1 |
|---|---|
| Distance: | -8 |
| Num_trans: | 22 |
| All_trans: | ENST00000473209.1:-8 uc057caj.1:-8 NM_003039:9 NM_001135585:9 ENST00000377424.8:121 uc001apo.4:121 AK294368:185 AK290398:219 M55531:226 ENST00000377414.7:233 uc001app.5:233 BC035878:233 AK295785:241 BC001692:250 BC001820:250 AK289849:253 AK300091:292 KJ892149:299 KJ892150:299 CU674838:299 DQ892291:300 DQ895491:300 |
TATA-Box annotation
| Distance to TSS: | -12 |
|---|---|
| Nearest PromoterID: | NM_003039 |
| Entrez ID: | 6518 |
| Nearest Unigene: | Hs.530003 |
| Nearest Refseq: | NM_003039 |
| Nearest Ensembl: | ENSG00000142583 |
| Gene Name: | solute carrier family 2 member 5 |
| Gene Alias: | GLUT-5 |
| Gene Description: | solute carrier family 2 member 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
