Difference between revisions of "TSS:Hg 95537.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000356994.6:265 ENST00000320476.7:265 NM_182706:265 NM_015356:265 uc003yzp.1:265 uc003yzo.1:265 AY062238:265 BC146321:268 AB383767:269 D63481:270...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |SCRB1= | ||
| + | |SCRIB1= | ||
| + | |Vartul= | ||
|all_trans=ENST00000356994.6:265 ENST00000320476.7:265 NM_182706:265 NM_015356:265 uc003yzp.1:265 uc003yzo.1:265 AY062238:265 BC146321:268 AB383767:269 D63481:270 AF240677:272 | |all_trans=ENST00000356994.6:265 ENST00000320476.7:265 NM_182706:265 NM_015356:265 uc003yzp.1:265 uc003yzo.1:265 AY062238:265 BC146321:268 AB383767:269 D63481:270 AF240677:272 | ||
|chr=chr8 | |chr=chr8 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=-332 | |distance_to_tss=-332 | ||
|end=143815779 | |end=143815779 | ||
| + | |end_of_center_position=143815712 | ||
|entrez_id=23513 | |entrez_id=23513 | ||
|gc_percent=0.810945 | |gc_percent=0.810945 | ||
| − | |gene_alias=CRIB1 | + | |gene_alias=CRIB1 |
|gene_description=scribbled planar cell polarity protein | |gene_description=scribbled planar cell polarity protein | ||
|gene_id=23513 | |gene_id=23513 | ||
| Line 24: | Line 28: | ||
|species=human | |species=human | ||
|start=143815643 | |start=143815643 | ||
| + | |start_of_center_position=143815711 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000356994.6 ENST00000320476.7 NM_182706 NM_015356 uc003yzp.1 uc003yzo.1 AY062238 | |transcript_name=ENST00000356994.6 ENST00000320476.7 NM_182706 NM_015356 uc003yzp.1 uc003yzo.1 AY062238 | ||
Revision as of 03:17, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 143815711 |
|---|---|
| End of the center position in the TSS region: | 143815712 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000356994.6 ENST00000320476.7 NM_182706 NM_015356 uc003yzp.1 uc003yzo.1 AY062238 |
|---|---|
| Distance: | 265 |
| Num_trans: | 11 |
| All_trans: | ENST00000356994.6:265 ENST00000320476.7:265 NM_182706:265 NM_015356:265 uc003yzp.1:265 uc003yzo.1:265 AY062238:265 BC146321:268 AB383767:269 D63481:270 AF240677:272 |
TATA-Box annotation
| Distance to TSS: | -332 |
|---|---|
| Nearest PromoterID: | NM_015356 |
| Entrez ID: | 23513 |
| Nearest Unigene: | Hs.436329 |
| Nearest Refseq: | NM_015356 |
| Nearest Ensembl: | ENSG00000180900 |
| Gene Name: | scribbled planar cell polarity protein |
| Gene Alias: | CRIB1 |
| Gene Description: | scribbled planar cell polarity protein |
| Gene Type: | protein-coding |
| CpG%: | 0.175 |
| GC%: | 0.810945 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
