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Difference between revisions of "TSS:Hg 96301.1"

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(Created page with "{{TSSDetail |all_trans=ENST00000468603.6:240 uc064skl.1:240 ENST00000584351.5:253 ENST00000583719.5:253 ENST00000580467.5:253 ENST00000585267.5:253 ENST00000580576.5:253 ENST0...")
 
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{{TSSDetail
 
{{TSSDetail
 +
|CDK4I=
 +
|CDKN2=
 +
|CMM2=
 +
|INK4=
 +
|INK4A=
 +
|MLM=
 +
|MTS-1=
 +
|MTS1=
 +
|P14=
 +
|P14ARF=
 +
|P16=
 +
|P16-INK4A=
 +
|P16INK4=
 +
|P16INK4A=
 +
|P19=
 +
|P19ARF=
 +
|TP16=
 
|all_trans=ENST00000468603.6:240 uc064skl.1:240 ENST00000584351.5:253 ENST00000583719.5:253 ENST00000580467.5:253 ENST00000585267.5:253 ENST00000580576.5:253 ENST00000428597.5:253 NR_047543:253 NR_047542:253 NR_047541:253 NR_047540:253 NR_047539:253 NR_047538:253 NR_047537:253 NR_047536:253 NR_047535:253 NR_003529:253 NR_047533:253 NR_047534:253 NR_047532:253 NR_120536:253 uc022bed.1:253 uc022bef.1:253 uc010miw.1:253 uc022bel.2:253 uc022bek.2:253 uc003zpm.4:253 DQ485454:253 GQ422823:253 GQ495926:253 GQ495925:253 AB548314:253 DQ485453:253 ENST00000582301.5:364 ENST00000584816.5:364 ENST00000584020.5:364 ENST00000577551.5:364 ENST00000584637.5:364 ENST00000581051.5:364 ENST00000582072.5:364 uc022bee.2:364 uc022beg.2:364 uc022ben.2:364 uc022bem.2:364 uc022bei.2:364 uc022beh.2:364 uc022bej.2:364 GQ495924:364 GQ495918:364 GQ495919:364 GQ495920:364 GQ495921:364 GQ495922:364 GQ495923:364
 
|all_trans=ENST00000468603.6:240 uc064skl.1:240 ENST00000584351.5:253 ENST00000583719.5:253 ENST00000580467.5:253 ENST00000585267.5:253 ENST00000580576.5:253 ENST00000428597.5:253 NR_047543:253 NR_047542:253 NR_047541:253 NR_047540:253 NR_047539:253 NR_047538:253 NR_047537:253 NR_047536:253 NR_047535:253 NR_003529:253 NR_047533:253 NR_047534:253 NR_047532:253 NR_120536:253 uc022bed.1:253 uc022bef.1:253 uc010miw.1:253 uc022bel.2:253 uc022bek.2:253 uc003zpm.4:253 DQ485454:253 GQ422823:253 GQ495926:253 GQ495925:253 AB548314:253 DQ485453:253 ENST00000582301.5:364 ENST00000584816.5:364 ENST00000584020.5:364 ENST00000577551.5:364 ENST00000584637.5:364 ENST00000581051.5:364 ENST00000582072.5:364 uc022bee.2:364 uc022beg.2:364 uc022ben.2:364 uc022bem.2:364 uc022bei.2:364 uc022beh.2:364 uc022bej.2:364 GQ495924:364 GQ495918:364 GQ495919:364 GQ495920:364 GQ495921:364 GQ495922:364 GQ495923:364
 
|chr=chr9
 
|chr=chr9
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|distance_to_tss=-43
 
|distance_to_tss=-43
 
|end=21994538
 
|end=21994538
 +
|end_of_center_position=21994534
 
|entrez_id=1029
 
|entrez_id=1029
 
|gc_percent=0.781095
 
|gc_percent=0.781095
−
|gene_alias=ARF|CDK4I|CDKN2|CMM2|INK4|INK4A|MLM|MTS-1|MTS1|P14|P14ARF|P16|P16-INK4A|P16INK4|P16INK4A|P19|P19ARF|TP16
+
|gene_alias=ARF
 
|gene_description=cyclin dependent kinase inhibitor 2A
 
|gene_description=cyclin dependent kinase inhibitor 2A
 
|gene_id=100048912
 
|gene_id=100048912
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|species=human
 
|species=human
 
|start=21994529
 
|start=21994529
 +
|start_of_center_position=21994533
 
|strand=+
 
|strand=+
 
|transcript_name=ENST00000468603.6 uc064skl.1
 
|transcript_name=ENST00000468603.6 uc064skl.1

Revision as of 05:36, 11 May 2019

Basic information about the TSS

TSS ID:hg_96301.1
Species:human
Chr:chr9
TSS Classification:yes
Start:21994529
End:21994538
Strand:+
TSS Score:1
Start of the center position in the TSS region:21994533
End of the center position in the TSS region:21994534



Gene and protein annotation

Transcript_name:ENST00000468603.6 uc064skl.1
Distance:240
GeneID:100048912
HGNC/MGI_ID:HGNC:34341
UniProt_ID:
Gene_name:CDKN2B antisense RNA 1
Gene_symbol:CDKN2B-AS1
Gene_synonyms:ANRIL CDKN2B-AS CDKN2BAS NCRNA00089 PCAT12 RP11-145E5.4 p15AS
Gene_source:HGNC:34341



Transcript annotation

Transcript_name:ENST00000468603.6 uc064skl.1
Distance:240
Num_trans:55
All_trans:ENST00000468603.6:240 uc064skl.1:240 ENST00000584351.5:253 ENST00000583719.5:253 ENST00000580467.5:253 ENST00000585267.5:253 ENST00000580576.5:253 ENST00000428597.5:253 NR_047543:253 NR_047542:253 NR_047541:253 NR_047540:253 NR_047539:253 NR_047538:253 NR_047537:253 NR_047536:253 NR_047535:253 NR_003529:253 NR_047533:253 NR_047534:253 NR_047532:253 NR_120536:253 uc022bed.1:253 uc022bef.1:253 uc010miw.1:253 uc022bel.2:253 uc022bek.2:253 uc003zpm.4:253 DQ485454:253 GQ422823:253 GQ495926:253 GQ495925:253 AB548314:253 DQ485453:253 ENST00000582301.5:364 ENST00000584816.5:364 ENST00000584020.5:364 ENST00000577551.5:364 ENST00000584637.5:364 ENST00000581051.5:364 ENST00000582072.5:364 uc022bee.2:364 uc022beg.2:364 uc022ben.2:364 uc022bem.2:364 uc022bei.2:364 uc022beh.2:364 uc022bej.2:364 GQ495924:364 GQ495918:364 GQ495919:364 GQ495920:364 GQ495921:364 GQ495922:364 GQ495923:364



TATA-Box annotation

Distance to TSS:-43
Nearest PromoterID:NM_058195
Entrez ID:1029
Nearest Unigene:Hs.512599
Nearest Refseq:NM_000077
Nearest Ensembl:ENSG00000147889
Gene Name:CDKN2B antisense RNA 1
Gene Alias:ARF
Gene Description:cyclin dependent kinase inhibitor 2A
Gene Type:protein-coding
CpG%:0.125
GC%:0.781095
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):
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