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Difference between revisions of "TSS:Hg 96303.1"

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(Created page with "{{TSSDetail |all_trans=ENST00000468603.6:0 ENST00000584351.5:0 ENST00000583719.5:0 ENST00000580467.5:0 ENST00000585267.5:0 ENST00000580576.5:0 ENST00000428597.5:0 NR_047543:0...")
 
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{{TSSDetail
 
{{TSSDetail
 +
|CDKN2B-AS=
 +
|CDKN2BAS=
 +
|NCRNA00089=
 +
|PCAT12=
 
|all_trans=ENST00000468603.6:0 ENST00000584351.5:0 ENST00000583719.5:0 ENST00000580467.5:0 ENST00000585267.5:0 ENST00000580576.5:0 ENST00000428597.5:0 NR_047543:0 NR_047542:0 NR_047541:0 NR_047540:0 NR_047539:0 NR_047538:0 NR_047537:0 NR_047536:0 NR_047535:0 NR_003529:0 NR_047533:0 NR_047534:0 NR_047532:0 NR_120536:0 uc064skl.1:0 uc022bed.1:0 uc022bef.1:0 uc010miw.1:0 uc022bel.2:0 uc022bek.2:0 uc003zpm.4:0 DQ485454:0 GQ422823:0 GQ495926:0 GQ495925:0 AB548314:0 DQ485453:0 ENST00000582301.5:67 ENST00000584816.5:67 ENST00000584020.5:67 ENST00000577551.5:67 ENST00000584637.5:67 ENST00000581051.5:67 ENST00000582072.5:67 uc022bee.2:67 uc022beg.2:67 uc022ben.2:67 uc022bem.2:67 uc022bei.2:67 uc022beh.2:67 uc022bej.2:67 GQ495924:67 GQ495918:67 GQ495919:67 GQ495920:67 GQ495921:67 GQ495922:67 GQ495923:67 ENST00000455933.6:260 uc010mix.2:260 EU741058:260
 
|all_trans=ENST00000468603.6:0 ENST00000584351.5:0 ENST00000583719.5:0 ENST00000580467.5:0 ENST00000585267.5:0 ENST00000580576.5:0 ENST00000428597.5:0 NR_047543:0 NR_047542:0 NR_047541:0 NR_047540:0 NR_047539:0 NR_047538:0 NR_047537:0 NR_047536:0 NR_047535:0 NR_003529:0 NR_047533:0 NR_047534:0 NR_047532:0 NR_120536:0 uc064skl.1:0 uc022bed.1:0 uc022bef.1:0 uc010miw.1:0 uc022bel.2:0 uc022bek.2:0 uc003zpm.4:0 DQ485454:0 GQ422823:0 GQ495926:0 GQ495925:0 AB548314:0 DQ485453:0 ENST00000582301.5:67 ENST00000584816.5:67 ENST00000584020.5:67 ENST00000577551.5:67 ENST00000584637.5:67 ENST00000581051.5:67 ENST00000582072.5:67 uc022bee.2:67 uc022beg.2:67 uc022ben.2:67 uc022bem.2:67 uc022bei.2:67 uc022beh.2:67 uc022bej.2:67 GQ495924:67 GQ495918:67 GQ495919:67 GQ495920:67 GQ495921:67 GQ495922:67 GQ495923:67 ENST00000455933.6:260 uc010mix.2:260 EU741058:260
 
|chr=chr9
 
|chr=chr9
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|distance_to_tss=15
 
|distance_to_tss=15
 
|end=21994835
 
|end=21994835
 +
|end_of_center_position=21994806
 
|entrez_id=100048912
 
|entrez_id=100048912
 
|gc_percent=0.676617
 
|gc_percent=0.676617
−
|gene_alias=ANRIL|CDKN2B-AS|CDKN2BAS|NCRNA00089|PCAT12|p15AS
+
|gene_alias=ANRIL
 
|gene_description=CDKN2B antisense RNA 1
 
|gene_description=CDKN2B antisense RNA 1
 
|gene_id=100048912
 
|gene_id=100048912
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|nearest_unigene=Hs.493614
 
|nearest_unigene=Hs.493614
 
|num_trans=58
 
|num_trans=58
 +
|p15AS=
 
|species=human
 
|species=human
 
|start=21994776
 
|start=21994776
 +
|start_of_center_position=21994805
 
|strand=+
 
|strand=+
 
|transcript_name=ENST00000468603.6 ENST00000584351.5 ENST00000583719.5 ENST00000580467.5 ENST00000585267.5 ENST00000580576.5 ENST00000428597.5 NR_047543 NR_047542 NR_047541 NR_047540 NR_047539 NR_047538 NR_047537 NR_047536 NR_047535 NR_003529 NR_047533 NR_047534 NR_047532 NR_120536 uc064skl.1 uc022bed.1 uc022bef.1 uc010miw.1 uc022bel.2 uc022bek.2 uc003zpm.4 DQ485454 GQ422823 GQ495926 GQ495925 AB548314 DQ485453
 
|transcript_name=ENST00000468603.6 ENST00000584351.5 ENST00000583719.5 ENST00000580467.5 ENST00000585267.5 ENST00000580576.5 ENST00000428597.5 NR_047543 NR_047542 NR_047541 NR_047540 NR_047539 NR_047538 NR_047537 NR_047536 NR_047535 NR_003529 NR_047533 NR_047534 NR_047532 NR_120536 uc064skl.1 uc022bed.1 uc022bef.1 uc010miw.1 uc022bel.2 uc022bek.2 uc003zpm.4 DQ485454 GQ422823 GQ495926 GQ495925 AB548314 DQ485453

Revision as of 05:36, 11 May 2019

Basic information about the TSS

TSS ID:hg_96303.1
Species:human
Chr:chr9
TSS Classification:yes
Start:21994776
End:21994835
Strand:+
TSS Score:1
Start of the center position in the TSS region:21994805
End of the center position in the TSS region:21994806



Gene and protein annotation

Transcript_name:ENST00000468603.6 ENST00000584351.5 ENST00000583719.5 ENST00000580467.5 ENST00000585267.5 ENST00000580576.5 ENST00000428597.5 NR_047543 NR_047542 NR_047541 NR_047540 NR_047539 NR_047538 NR_047537 NR_047536 NR_047535 NR_003529 NR_047533 NR_047534 NR_047532 NR_120536 uc064skl.1 uc022bed.1 uc022bef.1 uc010miw.1 uc022bel.2 uc022bek.2 uc003zpm.4 DQ485454 GQ422823 GQ495926 GQ495925 AB548314 DQ485453
Distance:0
GeneID:100048912
HGNC/MGI_ID:HGNC:34341
UniProt_ID:
Gene_name:CDKN2B antisense RNA 1
Gene_symbol:CDKN2B-AS1
Gene_synonyms:ANRIL CDKN2B-AS CDKN2BAS NCRNA00089 PCAT12 RP11-145E5.4 p15AS
Gene_source:HGNC:34341



Transcript annotation

Transcript_name:ENST00000468603.6 ENST00000584351.5 ENST00000583719.5 ENST00000580467.5 ENST00000585267.5 ENST00000580576.5 ENST00000428597.5 NR_047543 NR_047542 NR_047541 NR_047540 NR_047539 NR_047538 NR_047537 NR_047536 NR_047535 NR_003529 NR_047533 NR_047534 NR_047532 NR_120536 uc064skl.1 uc022bed.1 uc022bef.1 uc010miw.1 uc022bel.2 uc022bek.2 uc003zpm.4 DQ485454 GQ422823 GQ495926 GQ495925 AB548314 DQ485453
Distance:0
Num_trans:58
All_trans:ENST00000468603.6:0 ENST00000584351.5:0 ENST00000583719.5:0 ENST00000580467.5:0 ENST00000585267.5:0 ENST00000580576.5:0 ENST00000428597.5:0 NR_047543:0 NR_047542:0 NR_047541:0 NR_047540:0 NR_047539:0 NR_047538:0 NR_047537:0 NR_047536:0 NR_047535:0 NR_003529:0 NR_047533:0 NR_047534:0 NR_047532:0 NR_120536:0 uc064skl.1:0 uc022bed.1:0 uc022bef.1:0 uc010miw.1:0 uc022bel.2:0 uc022bek.2:0 uc003zpm.4:0 DQ485454:0 GQ422823:0 GQ495926:0 GQ495925:0 AB548314:0 DQ485453:0 ENST00000582301.5:67 ENST00000584816.5:67 ENST00000584020.5:67 ENST00000577551.5:67 ENST00000584637.5:67 ENST00000581051.5:67 ENST00000582072.5:67 uc022bee.2:67 uc022beg.2:67 uc022ben.2:67 uc022bem.2:67 uc022bei.2:67 uc022beh.2:67 uc022bej.2:67 GQ495924:67 GQ495918:67 GQ495919:67 GQ495920:67 GQ495921:67 GQ495922:67 GQ495923:67 ENST00000455933.6:260 uc010mix.2:260 EU741058:260



TATA-Box annotation

Distance to TSS:15
Nearest PromoterID:NR_003529
Entrez ID:100048912
Nearest Unigene:Hs.493614
Nearest Refseq:NR_003529
Nearest Ensembl:ENSG00000240498
Gene Name:CDKN2B antisense RNA 1
Gene Alias:ANRIL
Gene Description:CDKN2B antisense RNA 1
Gene Type:ncRNA
CpG%:0.1
GC%:0.676617
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):
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